IML-DKFZ / nnunet-workshopLinks
☆53Updated 2 years ago
Alternatives and similar repositories for nnunet-workshop
Users that are interested in nnunet-workshop are comparing it to the libraries listed below
Sorting:
- End-to-end Python CT volume preprocessing pipeline to convert raw DICOMs into clean 3D numpy arrays for ML. From paper Draelos et al. "Ma…☆74Updated 5 years ago
- ☆29Updated 4 months ago
- ☆119Updated last month
- Medical Image Radiomics Processor☆76Updated this week
- A package to compute medical segmentation metrics.☆180Updated last year
- Computed tomography to body composition (Comp2Comp).☆105Updated 3 weeks ago
- Implementation of the DeepVesselNet deep learning network☆154Updated 2 years ago
- MOOSE (Multi-organ objective segmentation) a data-centric AI solution that generates multilabel organ segmentations to facilitate systemi…☆304Updated last week
- Code to preprocess, segment, and fuse glioma MRI scans based on the BraTS Toolkit manuscript.☆98Updated 4 months ago
- DICOM RT-Struct to mask☆102Updated last year
- Processing Library and Analysis Toolkit for Medical Imaging in Python☆145Updated 7 months ago
- A 3D Slicer extension for efficient segmentation with nnInteractive.☆126Updated last week
- TotalSegmentator packaged as an AIDE Application, based on the MONAI Application Package (MAP) standard.☆32Updated last year
- Transparent and reproducible medical image processing pipelines in Python.☆56Updated 2 weeks ago
- Code for "Segment Anything Model for Medical Image Analysis: an Experimental Study" in Medical Image Analysis☆169Updated last year
- This is a 3D Slicer extension for segmentation and spatial reconstruction of infiltrated, collapsed, and emphysematous areas in lung CT.☆86Updated last year
- Segmentation deep learning ALgorithm based on MONai toolbox: single and multi-label segmentation software developed by QIMP team-Vienna.☆124Updated 4 years ago
- An AI-powered open-source medical image analysis toolbox☆73Updated last year
- Precision medicine toolbox☆70Updated last year
- SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI☆116Updated last year
- Robust Brain Extraction Tool for CT Head Images☆51Updated 5 years ago
- Model for the detection, segmentation, and classification of prostate lesions from mpMRI, using ProstateX data and Retina U-Net☆71Updated 3 years ago
- ☆146Updated last month
- Softmax for Arbitrary Label Trees (SALT) is a framework for training segmentation networks using conditional probabilities to model hiera…☆81Updated last year
- Lesion and prostate masks for the PROSTATEx training dataset, after a lesion-by-lesion quality check.☆89Updated 3 years ago
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆84Updated last month
- ☆36Updated last year
- Airway segmentation from chest CTs using deep Convolutional Neural Networks☆71Updated last year
- ☆125Updated 3 months ago
- Robust Segmentation and Labeling of Vertebrae, Intervertebral Discs, Spinal Cord, and Spinal Canal in MRI Images Using nnU-Net and Iterat…☆82Updated this week