IML-DKFZ / nnunet-workshopLinks
☆52Updated 2 years ago
Alternatives and similar repositories for nnunet-workshop
Users that are interested in nnunet-workshop are comparing it to the libraries listed below
Sorting:
- End-to-end Python CT volume preprocessing pipeline to convert raw DICOMs into clean 3D numpy arrays for ML. From paper Draelos et al. "Ma…☆74Updated 5 years ago
- Computed tomography to body composition (Comp2Comp).☆103Updated this week
- Precision medicine toolbox☆70Updated last year
- DICOM RT-Struct to mask☆102Updated last year
- Processing Library and Analysis Toolkit for Medical Imaging in Python☆144Updated 7 months ago
- A package to compute medical segmentation metrics.☆179Updated last year
- SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI☆115Updated last year
- TotalSegmentator packaged as an AIDE Application, based on the MONAI Application Package (MAP) standard.☆32Updated last year
- Medical Image Radiomics Processor☆76Updated last month
- Transparent and reproducible medical image processing pipelines in Python.☆56Updated 3 weeks ago
- Lesion and prostate masks for the PROSTATEx training dataset, after a lesion-by-lesion quality check.☆89Updated 3 years ago
- MONAI Model Zoo that hosts models in the MONAI Bundle format.☆285Updated last month
- Code to preprocess, segment, and fuse glioma MRI scans based on the BraTS Toolkit manuscript.☆95Updated 3 months ago
- MOOSE (Multi-organ objective segmentation) a data-centric AI solution that generates multilabel organ segmentations to facilitate systemi…☆301Updated last month
- Code for "Segment Anything Model for Medical Image Analysis: an Experimental Study" in Medical Image Analysis☆169Updated last year
- ☆120Updated 3 months ago
- Softmax for Arbitrary Label Trees (SALT) is a framework for training segmentation networks using conditional probabilities to model hiera…☆81Updated last year
- ☆29Updated 4 months ago
- This is a 3D Slicer extension for segmentation and spatial reconstruction of infiltrated, collapsed, and emphysematous areas in lung CT.☆86Updated last year
- Neural Pre Processing is an end-to-end weakly supervised learning approach for converting raw head MRI images to intensity-normalized, sk…☆31Updated last year
- ☆119Updated 2 weeks ago
- ☆145Updated 3 weeks ago
- Airway segmentation from chest CTs using deep Convolutional Neural Networks☆71Updated last year
- The official repository of "AbdomenCT-1K: Is Abdominal Organ Segmentation A Solved Problem?"☆259Updated 2 years ago
- ☆77Updated 4 months ago
- Tools to help with the conversion of DICOM images, RT Structures, and dose to useful Python objects. Essentially DICOM to NumPy and Simpl…☆105Updated last year
- Implementation of the DeepVesselNet deep learning network☆152Updated 2 years ago
- Official repository for autoPET I+II machine lerning challenge☆83Updated last year
- This Repo Will contain the Preprocessing Code for 3D Medical Imaging☆215Updated 5 years ago
- A Large-Scale Dataset for Spinal Vertebrae Segmentation in Computed Tomography☆187Updated 7 months ago