Fast Whole Brain Segmentation (Layers, codes and Pre-trained Models)
☆66Apr 9, 2019Updated 7 years ago
Alternatives and similar repositories for QuickNATv2
Users that are interested in QuickNATv2 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- PyTorch Implementation of QuickNAT and Bayesian QuickNAT, a fast brain MRI segmentation framework with segmentation Quality control using…☆104Jan 7, 2021Updated 5 years ago
- Pytorch Implementations of Common modules, blocks and losses for CNNs specifically for segmentation models☆33Feb 2, 2021Updated 5 years ago
- ☆19Dec 28, 2016Updated 9 years ago
- Retinal Layers and Fluid Segmentation in Macular OCT scans (code + Pre-trained Model)☆33Mar 9, 2018Updated 8 years ago
- Convert torch model to/from caffe model easily☆12Nov 29, 2016Updated 9 years ago
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- [TMI'20] Code for "Ψ-Net: Stacking Densely Convolutional LSTMs for Sub-Cortical Brain Structure Segmentation".☆23Jan 29, 2021Updated 5 years ago
- PyTorch Implementation of 2D and 3D 'squeeze and excitation' blocks for Fully Convolutional Neural Networks☆319Jun 23, 2020Updated 5 years ago
- Deep Whole Brain Segmentation Using SLANT Method☆130Dec 3, 2023Updated 2 years ago
- Pytorch Implementation of retinal OCT Layer Segmentation (with trained models)☆93Jul 10, 2018Updated 7 years ago
- Sub-cortical brain tissue segmentation using CNN☆14Sep 28, 2017Updated 8 years ago
- ACEnet: Anatomical Context-Encoding Network for Neuroanatomy Segmentation☆16Feb 14, 2022Updated 4 years ago
- NIMH Macaque Template☆19Mar 5, 2021Updated 5 years ago
- Shanoir (SHAring iN vivO Imaging Resources)☆26Updated this week
- Multiple Automatically Generated Templates brain segmentation algorithm☆50Jun 18, 2024Updated last year
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- XNAT Container Service☆13Jan 7, 2026Updated 3 months ago
- A prototype an algorithm to calibrate the CBCT geometry☆24Nov 13, 2025Updated 5 months ago
- Musculoskeletal Analysis extension for 3D Slicer. Currently has cortical, cancellous, and bone density analysis.☆12May 2, 2024Updated last year
- A python implementation of the Radiomics approach by Aerts et al (http://www.nature.com/articles/ncomms5006)☆10Mar 22, 2017Updated 9 years ago
- A helper allows you to manage your deep learning model‘s parameters in a convenient way.☆11Nov 25, 2020Updated 5 years ago
- Wave propagation simulator☆15Updated this week
- CBCT Reconstruction toolkit for Varian and Elekta (Mirror of GitLab)☆22Feb 5, 2021Updated 5 years ago
- Research work about learning to do tracking.☆13Jun 28, 2019Updated 6 years ago
- This repository corresponds to the evaluation code used for the REFUGE challenge. Please, use it as a sanity check to verify that the for…☆16Feb 5, 2019Updated 7 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆19Mar 24, 2026Updated 3 weeks ago
- Code to reproduce the main results in: Siebenhühner et al., 2020, "Resting-state cross-frequency coupling networks in human electrophysio…☆11Mar 11, 2020Updated 6 years ago
- ☆11Aug 11, 2021Updated 4 years ago
- Brain Hippocampus Segmentation. deprecated, use hippodeep_pytorch instead☆35Feb 27, 2020Updated 6 years ago
- ☆14Apr 6, 2026Updated last week
- Multi Atlas Segmentation of brain anatomy using ANTs☆32Oct 26, 2016Updated 9 years ago
- 3D convolutional neural network for MRI brain extraction☆125Mar 22, 2021Updated 5 years ago
- Input-aware cuBLAS/clBLAS implementation for better performance☆17Aug 4, 2022Updated 3 years ago
- Image Segmentation using Fuzzy C-Means Clustering with Bias Field Correction☆19May 7, 2021Updated 4 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Montaging for microscopy imaging files☆30Updated this week
- ☆11Mar 22, 2026Updated 3 weeks ago
- Python implementation of Combat for data harmonisation, allowing also to remove unwanted effects☆16Oct 30, 2023Updated 2 years ago
- Multi Atlas Segmentation and Morphometric analysis toolkit (MASMAT) for mouse brain MRI☆40Nov 28, 2025Updated 4 months ago
- Prostate cancer segmentation based on MRI and PET images☆14Feb 3, 2018Updated 8 years ago
- BIDS Application for the Configurable Pipeline for the Analysis of Connectomes (C-PAC)☆14Mar 16, 2026Updated 3 weeks ago
- Code for the paper "CEREBRUM-7T: fast and fully-volumetric brain segmentation of 7 Tesla MR volumes"☆13Feb 24, 2026Updated last month