fepegar / vesseg
Brain vessel segmentation using 3D convolutional neural networks
☆43Updated 2 years ago
Alternatives and similar repositories for vesseg:
Users that are interested in vesseg are comparing it to the libraries listed below
- BRAVE-NET: Fully Automated Brain Vessel Segmentation In Patients with Cerebrovascular Disease☆40Updated 5 years ago
- The code in this repository is from my master thesis. This project aims to automatically segment carotid from 3D MR brain image, and use …☆28Updated 3 years ago
- 3D-Unet: patched based Pytorch implementation for medical images segmentation☆63Updated 3 years ago
- Implementation of the DeepVesselNet deep learning network☆147Updated last year
- A segmentation network for intracranial aneurysm on CTA images using pytorch☆41Updated 2 years ago
- ☆34Updated 5 years ago
- There are some examples of 3D Medical Image Process☆41Updated 5 years ago
- The project covers various deep learning models to automate the segmentation of knee cartilages using the diffusion weighted MRI☆23Updated 6 years ago
- Computes vesselness scores for 3-dimensional images.☆70Updated 8 years ago
- Structure and position aware graph neural network for airway labeling☆14Updated 3 years ago
- The code of paper "Transformer-based 3D U-Net for Pulmonary Vessel Segmentation and Artery-vein Separation from CT images"☆28Updated last month
- This repository contains the code used for the paper "Towards automated brain aneurysm detection in TOF-MRA: open data, weak labels, and …☆31Updated 2 years ago
- new and more efficient version for 3D discrete deformable registration, reaching the highest accuracy in several benchmarks☆105Updated last year
- Vessel and tube centerline extraction☆31Updated last month
- selected code for 3D-2D image registration using deep learning☆14Updated 8 months ago
- General deep learning-based fast image registration framework for clinical thoracic 4D CT data☆40Updated 6 years ago
- Model Zoo for parameter settings in Elastix, ITKElastix and SimpleElastix☆50Updated last month
- A module for 3D image augmentations for deep learning, specifically medical images such as CT, MRI.☆27Updated 4 years ago
- Extract brain and remove skulls from brain CT and CTA images☆33Updated last year
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆72Updated 9 months ago
- Pytorch implementation of the paper Iterative fully convolutional neural networks for automatic vertebra segmentation accepted in MIDL201…☆63Updated last year
- TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, …☆52Updated last month
- A pipeline to extract vessels from MR images and perform analysis. Code to my TPAMI paper "Tracking the adaptation and compensation proce…☆29Updated 3 years ago
- DRR generation by pycuda☆25Updated 6 years ago
- Repository for Vesselness algorithms☆47Updated 11 months ago
- [MICCAI'23] Topology Repairing of Disconnected Pulmonary Airways and Vessels: Baselines and a Dataset☆34Updated 11 months ago
- Segmentation of blood vessel from CTA scan using bone subtraction and an iterative thresholding seeking algorithm☆11Updated 4 years ago
- Lobe Segmentation☆31Updated 4 years ago
- A 3D Slicer extension that generates Digitally Reconstructed Radiographs☆12Updated last year
- Source code behind the paper Fully automatic and fast segmentation of the femur bone☆54Updated 5 years ago