dwave-examples / rna-foldingLinks
Finds the optimal stem configuration of an RNA sequence using the LeapHybridCQMSampler.
☆17Updated 2 years ago
Alternatives and similar repositories for rna-folding
Users that are interested in rna-folding are comparing it to the libraries listed below
Sorting:
- QBioCode is a suite of computational resources to support quantum applications in healthcare and life science data.☆31Updated last month
- A deep learning method for the prediction of internal ribosome entry sites (IRES) of circRNAs☆17Updated 4 months ago
- Integer programming based prediction of RNA secondary structures with pseudoknots☆21Updated last month
- This repository contains the code for our manuscript - 'The evolution, evolvability, and engineering gene regulatory DNA'☆96Updated 2 years ago
- Quantum Gene Regulatory Networks with Application to Single-cell Data☆19Updated 8 months ago
- Release of the whole cell E. coli model.☆71Updated 10 months ago
- Evaluating RNA structure prediction using diverse thermodynamic prediction tasks and high-throughput datasets.☆17Updated 3 years ago
- Learning to untangle genome assembly with graph neural networks.☆72Updated 11 months ago
- A 3-Dimensional View of Human Metabolism and Disease☆31Updated 7 years ago
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆62Updated last year
- A modular compiler for biological chemical reaction networks☆47Updated 3 weeks ago
- A collection of resources for Deep Learning in Python for Life Sciences (with focus on biotech and pharma).☆144Updated last month
- A deep learning approach for predicting high-confidence neoantigens by considering both the presentation possibilities of mutant peptides…☆43Updated 2 years ago
- Machine Learning in Medical Bioinformatics☆25Updated 6 months ago
- Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your co…☆74Updated 2 years ago
- Code for the analyses in the human reference interactome paper.☆28Updated 2 years ago
- An introductory workshop to protein language models☆16Updated 3 years ago
- Stochastic Sequence Propagation - A Keras Model for optimizing DNA, RNA and protein sequences based on a predictor☆50Updated last year
- bpRNA: Large-scale Annotation and Analysis of RNA Secondary Structure☆50Updated last year
- Methods for mapping genomic data onto 3D protein structure.☆28Updated 3 years ago
- a package for streamlined multidomain data integration and translation based on cross-modal autoencoders architectures☆29Updated 2 years ago
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆56Updated last year
- Deep networks for protein functional inference☆177Updated 4 months ago
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆73Updated 2 years ago
- PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…☆54Updated 3 months ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆75Updated 3 months ago
- GenSLMs: Genome-scale language models reveal SARS-CoV-2 evolutionary dynamics☆137Updated this week
- ☆68Updated 2 years ago
- Cello v2 is the continuation of the Cello genetic circuit design software.☆63Updated 3 years ago
- A machine learning tool to improve the effectiveness of strain engineering in synthetic biology☆59Updated last month