emir-munoz / amia-paper-template
A basic AMIA (American Medical Informatics Association) style compliant LaTeX paper skeleton
☆19Updated 9 years ago
Alternatives and similar repositories for amia-paper-template:
Users that are interested in amia-paper-template are comparing it to the libraries listed below
- Unofficial Journal of American Medical Informatics Association (JAMIA) Markdown Journal Article Template☆12Updated 8 years ago
- ☆28Updated 3 years ago
- Data and code from our "Inferring Which Medical Treatments Work from Reports of Clinical Trials", NAACL 2019. This work concerns inferrin…☆61Updated 3 years ago
- Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)☆59Updated 2 years ago
- ☆96Updated 2 years ago
- Implementation of Deep Patient Representation of Clinical Notes at Intensive Care Unit for Multi-Task Prediction☆32Updated 5 years ago
- Weak supervision methods for extracting real world evidence from EHRs☆33Updated 4 years ago
- A fine-tuned BERT using EHR notes.☆14Updated 5 years ago
- Code for the paper "Knowledge Base Completion for Constructing Problem-Oriented Medical Records" at MLHC 2020☆11Updated 3 years ago
- ☆38Updated 2 years ago
- This repository contains data and code for the paper"Comparing deep learning and concept extraction based methods for patient phenotyping…☆21Updated 6 years ago
- Patient Code & Text Representation Learning☆20Updated last year
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆64Updated 2 months ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆78Updated 2 years ago
- Natural language generation for discrete data in EHRs☆22Updated 5 years ago
- A Python Natural Language Processing Toolkit for Medical Text Generation☆75Updated 3 months ago
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆91Updated 7 months ago
- Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…☆41Updated last year
- Weakly supervised medical named entity classification☆70Updated 2 years ago
- Code and pretrained model for paper "Learning to Summarize Radiology Findings"☆79Updated 5 years ago
- Clinical XLNet: Modeling Sequential Clinical Notes and Predicting Prolonged Mechanical Ventilation☆46Updated 3 years ago
- Source code for Medical Concept Embedding with Time-Aware Embedding☆21Updated 5 years ago
- Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System☆40Updated 5 years ago
- A python package for removing duplicate text in clinical notes or other documents☆36Updated 4 years ago
- A clinical BERT-based NLP tool for parsing clinical trial abstracts following the PICO framework☆45Updated 4 years ago
- Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.☆40Updated 4 years ago
- ☆26Updated 4 years ago
- ☆33Updated 5 years ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆77Updated this week
- Clinical Text Summarization with Syntax-Based Negation and Semantic Concept Identification☆21Updated 4 years ago