Implementation of Needleman-Wunsch algorithm in Python Using Nested Functions.
☆13Jul 10, 2018Updated 8 years ago
Alternatives and similar repositories for nwunch
Users that are interested in nwunch are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Implementation of needleman wunsch algorithm for global sequence alignment☆10Mar 2, 2019Updated 7 years ago
- Needleman-Wunsch Algorithm for global alignment and local alignment☆12Feb 12, 2020Updated 6 years ago
- Efficient UPGMA implementation☆11Jul 1, 2014Updated 12 years ago
- A basic implementation of the UPGMA (Unweighted Pair Group Method with Arithmetic Mean) clustering algorithm in Python.☆13Dec 11, 2015Updated 10 years ago
- Demonstration of the UPGMA hierarchal clustering algorithm in Pandas, Seaborn, and Scipy☆11Sep 29, 2019Updated 7 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- This repository includes implementation codes or links to the authors’ original codes of filtering methods for denoising and completing d…☆14Aug 28, 2025Updated last year
- Using a GAN to generate a new dataset☆12Sep 13, 2021Updated 5 years ago
- Msuite2: integrated DNA methylation data analysis toolkit with enhanced performance☆10Jan 21, 2025Updated last year
- Marker-Based Motion Capture Data Denoising☆14Dec 21, 2021Updated 4 years ago
- Python Clone of the game "Color Switch"☆10Oct 15, 2018Updated 7 years ago
- Directly create a bigwig file with signal derived from a sorted and indexed bam file.☆11Jul 7, 2017Updated 9 years ago
- Mutational Signature Comprehensive Analysis Toolkit☆16Sep 27, 2026Updated 2 weeks ago
- pMoSS (p-value Model using the Sample Size) is a Python code to model the p-value as an n-dependent function using Monte Carlo cross-vali…☆16May 25, 2026Updated 4 months ago
- The ChIP-Seq peak calling algorithm using convolution neural networks☆15Jan 18, 2021Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Python CLI for alignment-free genomics.☆13May 25, 2026Updated 4 months ago
- Low dimensional Kalman smoother that fills gaps in motion capture marker trajectories☆17Aug 20, 2026Updated last month
- Functions to extract information from Oxford Nanopore sequencing data and alignments☆12Sep 28, 2026Updated 2 weeks ago
- R package with Shiny application for DGE analysis☆13Jan 8, 2024Updated 2 years ago
- GPT for FACodec☆13Mar 25, 2024Updated 2 years ago
- Breast tumor malignancy classification using machine learning☆14Feb 24, 2018Updated 8 years ago
- A Missile Command video game Atari clone coding in Python☆12Feb 3, 2024Updated 2 years ago
- Collection of R functions used in the Hochwagen Lab☆12Aug 4, 2025Updated last year
- A fast and space-efficient pre-filter for estimating the quantification of very large collections of nucleotide sequences☆16Oct 3, 2026Updated last week
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Implementing Laplacian score for feature selection☆19Feb 28, 2018Updated 8 years ago
- Fast python code to merge paired-end reads☆13Oct 29, 2021Updated 4 years ago
- ☆11Dec 4, 2023Updated 2 years ago
- Python argparse skeleton☆10Feb 9, 2021Updated 5 years ago
- genetic distance plotting for recombination events analysis☆10Jul 14, 2026Updated 2 months ago
- This is a basic Redis Rate Limiting demo written in NodeJS☆14Jun 27, 2023Updated 3 years ago
- Conditional Variational Autoencoder for the prediction of site-specific recombinases selective for a specified target site☆12Jun 23, 2023Updated 3 years ago
- ☆10Aug 29, 2012Updated 14 years ago
- Predicting transcription factor binding in single cells through deep learning☆15Oct 14, 2022Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆16Dec 21, 2022Updated 3 years ago
- A Discord bot designed to streamline start.gg tournaments and improve user quality-of-life through specialized commands.☆13Sep 27, 2024Updated 2 years ago
- Bioinformatics Algorithms☆16Dec 17, 2013Updated 12 years ago
- Scripts supporting identification of genomic features affecting survival time in cancer☆14Dec 6, 2018Updated 7 years ago
- Linear dynamical systems (aka Kalman filters)☆21May 20, 2021Updated 5 years ago
- Build similarity network from items with associated tags (for example documents with keywords)☆16Feb 16, 2023Updated 3 years ago
- Readme☆10Mar 15, 2020Updated 6 years ago