Alternatives and similar repositories for TransICD:

Users that are interested in TransICD are comparing it to the libraries listed below

• aehrc / LAAT
  A Label Attention Model for ICD Coding from Clinical Text
  ☆69Updated 2 years ago
• GanjinZero / ICD-MSMN
  Code Synonyms Do Matter: Multiple Synonyms Matching Network for Automatic ICD Coding [ACL 2022]
  ☆52Updated 2 years ago
• uf-hobi-informatics-lab / ClinicalTransformerRelationExtraction
  A project for developing transformer-based models for clinical relation extraction
  ☆127Updated last year
• kamalkraj / BioELECTRA
  BioELECTRA
  ☆51Updated 3 years ago
• uf-hobi-informatics-lab / ClinicalTransformerNER
  a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms
  ☆146Updated last year
• dmis-lab / BioSyn
  ACL'2020: Biomedical Entity Representations with Synonym Marginalization
  ☆162Updated last year
• sy-wada / blue_benchmark_with_transformers
  Implementation of the BLUE benchmark with Transformers.
  ☆20Updated last year
• bvanaken / clinical-outcome-prediction
  Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration
  ☆91Updated 6 months ago
• whaleloops / KEPT
  auto icd coding with prompt
  ☆48Updated 9 months ago
• emnlp-mimic / mimic
  ☆22Updated 3 years ago
• GanjinZero / KeBioLM
  Improving Biomedical Pretrained Language Models with Knowledge [BioNLP 2021]
  ☆65Updated 2 years ago
• acadTags / Explainable-Automated-Medical-Coding
  Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)
  ☆59Updated 2 years ago
• facebookresearch / bio-lm
  We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.
  ☆158Updated 3 years ago
• simonlevine / clinical-longformer
  ☆38Updated 2 years ago
• usmaann / BioALBERT
  Benchmarking for Biomedical Natural Language Processing Tasks with a Domain Specific ALBERT
  ☆27Updated 3 years ago
• heyunh2015 / diseaseBERT
  Code and dataset of EMNLP 2020 paper "Infusing Disease Knowledge into BERT for Health Question Answering, Medical Inference and Disease N…
  ☆68Updated 3 years ago
• GanjinZero / CODER
  CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]
  ☆79Updated 2 years ago
• cambridgeltl / cometa
  Corpus of Online Medical EnTities: the cometA corpus
  ☆50Updated 9 months ago
• laituan245 / rescnn_bioel
  ☆26Updated last year
• dhdhagar / arboEL
  Entity Linking & discovery solution. Agarwal et al., "Entity Linking via Explicit Mention-Mention Coreference Modeling", NAACL 2022.
  ☆26Updated 10 months ago
• dmis-lab / BioLAMA
  EMNLP'2021: Can Language Models be Biomedical Knowledge Bases?
  ☆55Updated last year
• danlou / MedLinker
  ECIR 2020 - MedLinker: Medical Entity Linking with Neural Representations and Dictionary Matching
  ☆29Updated last year
• cambridgeltl / sapbert
  [NAACL'21 & ACL'21] SapBERT: Self-alignment pretraining for BERT & XL-BEL: Cross-Lingual Biomedical Entity Linking.
  ☆182Updated last year
• justinphan3110 / SciFive
  SciFive: a text-text transformer model for biomedical literature
  ☆92Updated 8 months ago
• shreyashub / BioFLAIR
  BioFLAIR: Pretrained Pooled Contextualized Embeddings for Biomedical Sequence Labeling Tasks
  ☆41Updated 4 years ago
• dongfang91 / Generate-and-Rank-ConNorm
  Generate-and-Rank Framework with Semantic Type Regularization for Biomedical Concept Normalization
  ☆25Updated 3 years ago
• allenai / ms2
  ☆65Updated 2 years ago
• kingsaint / BioMedical-EL
  Fast and Effective Biomedical Entity Linking Using a Dual Encoder
  ☆19Updated 2 years ago
• dmis-lab / bioasq-biobert
  Pre-trained Language Model for Biomedical Question Answering
  ☆122Updated last year
• NLPatVCU / multitasking_transformers
  Multitask Learning with Pretrained Transformers
  ☆39Updated 3 years ago