biplob1ly / TransICDLinks
Transformer based ICD Coding model
☆18Updated 4 years ago
Alternatives and similar repositories for TransICD
Users that are interested in TransICD are comparing it to the libraries listed below
Sorting:
- A Label Attention Model for ICD Coding from Clinical Text☆71Updated 2 years ago
- Code Synonyms Do Matter: Multiple Synonyms Matching Network for Automatic ICD Coding [ACL 2022]☆53Updated 2 years ago
- A project for developing transformer-based models for clinical relation extraction☆129Updated last year
- We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.☆161Updated 3 years ago
- Implementation of the BLUE benchmark with Transformers.☆20Updated last year
- [NAACL 2021] This is the code for our paper `Fine-Tuning Pre-trained Language Model with Weak Supervision: A Contrastive-Regularized Self…☆203Updated 2 years ago
- ACL'2020: Biomedical Entity Representations with Synonym Marginalization☆169Updated 2 years ago
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆149Updated last year
- Code and dataset of EMNLP 2020 paper "Infusing Disease Knowledge into BERT for Health Question Answering, Medical Inference and Disease N…☆69Updated 4 years ago
- Improving Biomedical Pretrained Language Models with Knowledge [BioNLP 2021]☆65Updated 2 years ago
- Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)☆61Updated 3 years ago
- This repository contains the corpora and supplementary data, along with instructions for recreating the experiments, for our paper: "End-…☆91Updated 5 years ago
- SciFive: a text-text transformer model for biomedical literature☆96Updated last year
- Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration☆95Updated 11 months ago
- Implementation of Self-adjusting Dice Loss from "Dice Loss for Data-imbalanced NLP Tasks" paper☆108Updated 4 years ago
- Pre-trained Language Model for Biomedical Question Answering☆123Updated 2 years ago
- [NAACL'21 & ACL'21] SapBERT: Self-alignment pretraining for BERT & XL-BEL: Cross-Lingual Biomedical Entity Linking.☆194Updated 2 years ago
- https://arxiv.org/pdf/1909.04054☆79Updated 2 years ago
- BioELMo is a biomedical version of embeddings from language model (ELMo), pre-trained on PubMed abstracts.☆33Updated 5 years ago
- ☆33Updated 2 years ago
- ☆25Updated 2 years ago
- BioELECTRA☆50Updated 3 years ago
- Research framework for low resource text classification that allows the user to experiment with classification models and active learning…☆102Updated 3 years ago
- A Light and Modular PyTorch NLP Project Template☆59Updated 4 years ago
- BioFLAIR: Pretrained Pooled Contextualized Embeddings for Biomedical Sequence Labeling Tasks☆42Updated 5 years ago
- pyTorch implementation of Recurrence over BERT (RoBERT) based on this paper https://arxiv.org/abs/1910.10781 and comparison with pyTorch …☆82Updated 2 years ago
- State of the art Semantic Sentence Embeddings☆99Updated 3 years ago
- Collection of NLP model explanations and accompanying analysis tools☆144Updated 2 years ago
- architectures and pre-trained models for long document classification.☆155Updated 4 years ago
- Self-supervised NER prototype - updated version (69 entity types - 17 broad entity groups). Uses pretrained BERT models with no fine tuni…☆78Updated 3 years ago