☆20Feb 6, 2017Updated 9 years ago
Alternatives and similar repositories for MartiniTools
Users that are interested in MartiniTools are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Mapping from Coarse Grain Models to Atomistic (and Back)☆21Sep 27, 2023Updated 2 years ago
- INSert membrANE - A simple, versatile tool for building coarse-grained simulation systems☆91Apr 19, 2026Updated 3 months ago
- Webpage of the Bonvinlab @ Utrecht University and HADDOCK software☆13Jul 1, 2026Updated 3 weeks ago
- A general framework for microservice based distributed applications☆15Jan 10, 2026Updated 6 months ago
- Build coarse-grained mapping for molecules from a web-GUI☆19Sep 10, 2021Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Hypothesis strategy to generate NetworkX graphs.☆23Sep 15, 2023Updated 2 years ago
- Supernova's MM-PBSA binding free energy calculation tool.☆13Jul 13, 2026Updated last week
- Software for automated processing of alchemical free energy calculations☆12Nov 7, 2022Updated 3 years ago
- Set of tools for input preparation for conserved water search from MD trajectories (gromacs, amber) and their analysis☆20Updated this week
- QM/MM Study Group☆15Jan 22, 2019Updated 7 years ago
- Adaptation of the excellent open book How to Think Like a Computer Scientist☆23Apr 28, 2021Updated 5 years ago
- Differentiable Markov Chain Monte Carlo☆15Mar 23, 2024Updated 2 years ago
- Code for enumerating and evaluating numerical methods for Langevin dynamics using near-equilibrium estimates of the KL-divergence. Accomp…☆13Mar 28, 2018Updated 8 years ago
- A tool for visualizing Martini force field simulations in VMD☆25May 11, 2026Updated 2 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- TS2CG version 2☆27Apr 18, 2026Updated 3 months ago
- Data files for the molecular modelling course☆13Jan 26, 2024Updated 2 years ago
- Example files for Colvars module: https://github.com/Colvars/colvars☆14Dec 7, 2021Updated 4 years ago
- Data and script of Umbrella Sampling for molecular transmembrane☆14Jun 21, 2024Updated 2 years ago
- Dynamic Histogram Analysis To Determine Free Energies and Rates from Biased Simulations☆22Mar 13, 2018Updated 8 years ago
- ☆72Feb 13, 2026Updated 5 months ago
- COSMO: COarse-grained Simulation of intrinsically disordered prOteins with openMM☆15Jul 14, 2026Updated last week
- ☆12Jul 30, 2019Updated 6 years ago
- Swarm-CG: Automatic Parametrization of Bonded Terms in MARTINI-based Coarse-Grained Models of Simple to Complex Molecules via Fuzzy Self-…☆49Aug 19, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Bayesian Multistate Bennett Acceptance Ratio Method☆16Jun 28, 2026Updated 3 weeks ago
- ☆18Jan 15, 2026Updated 6 months ago
- Multiscale Simulation Tool for Backmapping☆22Mar 13, 2026Updated 4 months ago
- Automatic MARTINI parametrization of small organic molecules☆76May 28, 2025Updated last year
- Set of tools to generate a multi-eGO force field to perform molecular dynamics simulations☆16Updated this week
- ☆12Oct 24, 2017Updated 8 years ago
- This repo consists all my RL work and learnings☆12Dec 5, 2021Updated 4 years ago
- Random Acceleration Molecular Dynamics in GROMACS☆45Jul 19, 2024Updated 2 years ago
- Several QM/MM tutorials for biological simulations adapted to CP2K. Tutorials adapted from AMBER, GMX, NAMD and CPMD softwares.☆26Oct 18, 2019Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆10Oct 26, 2022Updated 3 years ago
- Martini 3 small molecule database☆73May 13, 2026Updated 2 months ago
- For the purpose of post progressing of MD carried by gromacs☆24Jul 2, 2025Updated last year
- Repository for MD methods and analysis from submitted or published work☆20Jun 10, 2023Updated 3 years ago
- ☆13Jan 13, 2025Updated last year
- Data from the COVID Moonshot project☆21Nov 9, 2023Updated 2 years ago
- ☆27Jan 20, 2022Updated 4 years ago