Alternatives and similar repositories for hippodeep_pytorch

Users that are interested in hippodeep_pytorch are comparing it to the libraries listed below

• bthyreau / hippodeep
  Brain Hippocampus Segmentation. deprecated, use hippodeep_pytorch instead
  ☆34Updated 5 years ago
• ANTsX / ANTsPyNet
  Pre-trained models and utilities for deep learning on medical images in Python (Keras/TensorFlow)
  ☆237Updated 2 weeks ago
• Jfortin1 / ComBatHarmonization
  Harmonization of multi-site imaging data with ComBat
  ☆313Updated 2 years ago
• MIC-DKFZ / TractSeg
  Automatic White Matter Bundle Segmentation
  ☆249Updated 2 years ago
• ha-ha-ha-han / UKBiobank_deep_pretrain
  Pretrained neural networks for UK Biobank brain MRI images. SFCN, 3D-ResNet etc.
  ☆162Updated last year
• CCI-Bonn / HD-BET
  Automated deep-learning based brain extraction applicable to a broad range of MRI sequence types and with robust performance even in the …
  ☆37Updated 4 years ago
• BBillot / SynthSR
  A framework for joint super-resolution and image synthesis, without requiring real training data
  ☆173Updated last year
• volBrain / AssemblyNet
  AssemblyNet: 3D Whole Brain MRI segmentation pipeline
  ☆67Updated 2 years ago
• SlicerDMRI / whitematteranalysis
  White matter tractography clustering and more...
  ☆80Updated 5 months ago
• Jfortin1 / MNITemplate
  MNI152 Template
  ☆48Updated 5 years ago
• AICONSlab / HippMapp3r
  AICONSlab's hippocampal segmentation algorithm using CNNs
  ☆31Updated last year
• CompImg / LST-AI
  LST-AI - Deep Learning Ensemble for Accurate MS Lesion Segmentation
  ☆40Updated 7 months ago
• vishnubashyam / DeepBrainNet
  Convolutional Neural Network trained for age prediction using a large (n=11,729) set of MRI scans from a highly diversified cohort spanni…
  ☆55Updated 5 years ago
• dama-lab / mouse-brain-atlas
  Multi-Template Mouse Brain MRI Atlas (MBMA): both in-vivo and ex-vivo
  ☆25Updated last year
• Jfortin1 / neuroCombat
  Harmonization of multi-site imaging data with ComBat (Python)
  ☆152Updated 2 years ago
• pieper / dicomsort
  A project to provide custom sorting and renaming of dicom files
  ☆79Updated 6 months ago
• BioMedIA / dhcp-structural-pipeline
  structural analysis of neonatal brain MRI scans
  ☆58Updated 4 years ago
• neurolabusc / Clinical
  Clinical Toolbox for SPM (https://www.nitrc.org/projects/clinicaltbx/)
  ☆47Updated 4 years ago
• WCHN / CTseg
  Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.
  ☆79Updated last year
• MIC-DKFZ / radtract
  RadTract: enhanced tractometry with radiomics-based imaging biomarkers for improved predictive modelling.
  ☆13Updated 2 months ago
• MIC-DKFZ / HD-BET
  MRI brain extraction tool
  ☆373Updated 10 months ago
• icometrix / dicom2nifti
  ☆383Updated 4 months ago
• viswanath-lab / RadQy
  RadQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) and computed tomography (C…
  ☆106Updated 3 months ago
• nipreps / smriprep
  Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)
  ☆155Updated this week
• scilus / scilpy
  The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox
  ☆77Updated this week
• yu02019 / BEN
  ☆30Updated last year
• benniatli / BrainAgePredictionResNet
  3D residual neural network that predicts age based on brain MRI images (implemented using TensorFlow 2).
  ☆66Updated 3 years ago
• npnl / ATLAS
  A space to log issues, updates, and software related to the ATLAS (Anatomical Tracings of Lesions After Stroke) database.
  ☆83Updated 2 years ago
• MASILab / cornn_tractography
  Convolutional-recurrent neural networks approximate diffusion tractography from T1-weighted MRI and associated anatomical context
  ☆19Updated 3 months ago
• miykael / gif_your_nifti
  How to create fancy GIFs from an MRI brain image
  ☆123Updated last year