quick segmentation of the hippocampus from T1 MRI images. (pytorch version)
☆31Dec 8, 2025Updated 2 months ago
Alternatives and similar repositories for hippodeep_pytorch
Users that are interested in hippodeep_pytorch are comparing it to the libraries listed below
Sorting:
- Brain Hippocampus Segmentation. deprecated, use hippodeep_pytorch instead☆35Feb 27, 2020Updated 6 years ago
- Hippocampus Segmentation from MRI using 3D Convolutional Neural Networks in PyTorch☆45May 8, 2021Updated 4 years ago
- Udacity AI for Healthcare Nanodegree Project: Measurement of Hippocampus Structure in MRI 3-D Images using Deep Learning Image Segmentat…☆16Oct 3, 2023Updated 2 years ago
- This contains official implementation for Extended 2D Volumetric Consensus Hippocampus Segmentation☆20Jul 19, 2021Updated 4 years ago
- AICONSlab's hippocampal segmentation algorithm using CNNs☆31Oct 10, 2024Updated last year
- Automated deep learning based segmentation of multiple sclerosis lesions on MRI☆13Sep 6, 2022Updated 3 years ago
- Quick parcellation of cortical-segmentation images of human brain☆13Sep 14, 2025Updated 5 months ago
- Automated deep-learning based brain tumor segmentation on MRI☆38Aug 24, 2022Updated 3 years ago
- Code for Multi-dimensional Gated Recurrent Units for the Segmentation of Biomedical Data☆21Mar 24, 2023Updated 2 years ago
- 利用ADNI数据集和标签,在tensorflow框架上使用tensorlayer接口,通过架构u-net实现海马体的分割。☆20Apr 11, 2018Updated 7 years ago
- DL+DiReCT - Direct Cortical Thickness Estimation using Deep Learning-based Anatomy Segmentation and Cortex Parcellation☆30Apr 16, 2025Updated 10 months ago
- CT Perfusion Toolbox☆27May 12, 2022Updated 3 years ago
- Perivascular (PVS) or Virchow–Robin Spaces (VRS) segmentation with a 3D Unet☆35Updated this week
- A radiomics tool with a variety of brain MRI processing functions, including affine registration, hippocampus segmentation and feature ca…☆29Jul 20, 2021Updated 4 years ago
- An integrated framework for DWI Image QC and processing☆13Feb 23, 2026Updated last week
- Pipeline used internally for Peter Bubenik's TDA Group at UF.☆11Nov 3, 2022Updated 3 years ago
- This repository houses the code for anatomically and physiologically motivated, hepatic vessel generation.☆12Apr 15, 2024Updated last year
- Python script to obtain dynamic functional connectivity metrics, after using a sliding window approach, statistical analyses to test for …☆12Sep 10, 2024Updated last year
- ABSOLUTE source code that works with allelic copy ratio on both hg19 and hg38☆13Nov 5, 2025Updated 3 months ago
- A collection of tools for pre-processing, simulating, and post-processing vascular fluid-structure-interaction problems☆15Dec 15, 2025Updated 2 months ago
- A page of information and resources on functional MRI. Suggestions welcome!☆10Sep 20, 2022Updated 3 years ago
- The Simulation Manager is a library for enabling reproducible scientific simulations.☆12May 1, 2023Updated 2 years ago
- ☆39Aug 21, 2018Updated 7 years ago
- Enhances iMessage Exporter by adding contact names to HTML message files and renaming files to include contact names.☆17Oct 9, 2025Updated 4 months ago
- Internationalization toolchain to translate Balatro's sprites☆12Feb 17, 2025Updated last year
- This code is used to automatically segment the left and right ventricles on bSSFP cardiac MRI. The aim of my project is to use these vent…☆10Dec 15, 2021Updated 4 years ago
- playing music using the MRI gradient system☆14Oct 4, 2020Updated 5 years ago
- ☆13Jun 2, 2023Updated 2 years ago
- Read and write mha files using Python☆10Oct 14, 2013Updated 12 years ago
- Code for running simulations and data analysis from: Cole MW, Ito T, Schultz D, Mill R, Chen R, Cocuzza C (2019). "Task activations prod…☆13Jul 6, 2023Updated 2 years ago
- Matlab for NIFTI support☆10Dec 26, 2018Updated 7 years ago
- ☆12Apr 21, 2021Updated 4 years ago
- ISBI 2023 - A Registration- and Uncertainty-based Framework for White Matter Tract Segmentation with Only One Annotated Subject☆10Sep 10, 2023Updated 2 years ago
- A command line tool for quantification of perfusion from ASL data☆12Jul 13, 2023Updated 2 years ago
- For days when you're asked to read 10,000 reviews to understand how players feel about your video game.☆10Aug 20, 2019Updated 6 years ago
- Deep spectral-based shape features for Alzheimer’s Disease classification☆10Jul 31, 2019Updated 6 years ago
- Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure☆191Jan 8, 2026Updated last month
- A PyTorch implementation of Fader Networks: Manipulating Images by Sliding Attributes by Lample et al.☆12Aug 27, 2017Updated 8 years ago
- codes for paper accepted in IPMI2025 titled: ''MAD-AD: Masked Diffusion Autoencoder for Unsupervised Brain Anomaly Detection"☆13Aug 26, 2025Updated 6 months ago