InstituteforDiseaseModeling / covid-health-systemsLinks
Simulate various COVID-19 health system capacity scenarios
☆13Updated 4 years ago
Alternatives and similar repositories for covid-health-systems
Users that are interested in covid-health-systems are comparing it to the libraries listed below
Sorting:
- Data and Codebook for the HIT-COVID Project☆22Updated 4 years ago
- Source code for the EpiEstim app.☆31Updated 5 years ago
- Interactive plotting for mathematical models of infectious disease spread☆14Updated 11 months ago
- Excess deaths due to COVID-19 pandemic in 2020☆11Updated 3 years ago
- epidemia package☆48Updated 2 years ago
- R package for deriving social mixing matrices from survey data.☆38Updated this week
- Repo for the course Statistical Methods in Infectious Disease Epidemiology at UZH☆18Updated 3 years ago
- Accompanying code for: Kucharski AJ, Klepac P et al. Effectiveness of isolation, testing, contact tracing, and physical distancing on red…☆13Updated 2 years ago
- Implication of overdispersed transmission of COVID-19 on the effectiveness of contact tracing☆8Updated 4 years ago
- ☆20Updated 2 years ago
- Epidemiological agent-based modelling packages in both python and C++. Published at: https://doi.org/10.5334/jors.449.☆18Updated 3 weeks ago
- European Covid-19 Forecast Hub.☆48Updated 7 months ago
- R package to implement and visualize several epidemiological forecasting methods.☆21Updated 10 months ago
- Estimate Realtime Case Counts and Time-varying Epidemiological Parameters☆33Updated 2 years ago
- ☆40Updated 10 months ago
- Utility functions for the COVID-19 forecast hub☆18Updated last year
- Interfacing several COVID-19 related datasets☆45Updated 3 years ago
- Analysis and cuts of data from the team behind the Oxford COVID policy tracker☆34Updated last year
- Bayesian estimation of Rt (C code)☆13Updated 5 years ago
- Basic Epidemic, Activity, and Response COVID-19 model☆31Updated 4 years ago
- SEIR transmission model of COVID-19. Documentation at:☆51Updated last year
- COVerAGE-DB: COVID-19 cases, deaths, and tests by age and sex☆57Updated last year
- Temporal variation in transmission during the COVID-19 outbreak☆109Updated 3 years ago
- Curated datasets on reported cases of the SARS-CoV-2 Omicron (B.1.1.529) Variant of Concern☆10Updated 3 years ago
- This is the data repository for the Imperial College London YouGov Covid 19 Behaviour Tracker Data Hub.☆87Updated 2 years ago
- Updates to the synthetic contact matrices☆36Updated last year
- Infectious disease model library and utilities☆14Updated 2 years ago
- Code associated with A population-level SEIR model for COVID-19 scenarios (updated) by James P. Gleeson, Thomas Brendan Murphy, Joseph D.…☆10Updated 4 years ago
- Bayesian nowcasting with adjustment for delayed and incomplete reporting to estimate COVID-19 infections in the United States☆27Updated 2 weeks ago
- In this work, we use S-gene target failure (SGTF) as a proxy of variant status combined with reported case counts to explore the evidence…☆15Updated 2 years ago