nerf-common / whole-brain-fUS
Whole-brain functional ultrasound imaging in awake head-fixed mice
☆11Updated 3 years ago
Alternatives and similar repositories for whole-brain-fUS:
Users that are interested in whole-brain-fUS are comparing it to the libraries listed below
- PREprocessing & Simulations for Transcranial Ultrasound Stimulation package☆15Updated last week
- MR to CT for TUS acoustic simulations☆24Updated 5 months ago
- Atlas-based Imaging Data Analysis Pipeline (AIDA) for structural and functional MRI of the mouse brain☆30Updated 2 weeks ago
- Matlab routines for online non-rigid motion correction of calcium imaging data☆146Updated 2 years ago
- A MATLAB toolbox for performing along-tract analysis of diffusion tensor imaging (DTI) MRI tractography data.☆43Updated 11 years ago
- Group ICA/IVA software (MATLAB)☆77Updated last week
- ClearMap 2 with WobblyStitcher, TubeMap and CellMap☆119Updated last month
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆48Updated this week
- DICOM to NIfTI conversion, NIfTI tools☆93Updated 4 months ago
- Tools for MRI mouse brain morphometry☆30Updated 8 years ago
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆52Updated 4 years ago
- ☆11Updated last year
- Preprocessing of diffusion MRI☆142Updated this week
- Automated 3D brain registration with support for multiple species and atlases.☆128Updated this week
- Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space☆49Updated 2 years ago
- Stand alone fMRI software suite for layer-fMRI analyses.☆91Updated 2 months ago
- Small Animal Magnetic Resonance Imaging via Python.☆42Updated 10 months ago
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆62Updated this week
- SEEG Assistant☆27Updated last year
- MRtrix3Tissue adds capabilities for 3-Tissue CSD modelling and analysis to a complete version of MRtrix3.☆11Updated 9 months ago
- Structural Neuroimaging Analysis in Python☆27Updated this week
- Lead-DBS is a MATLAB toolbox facilitating deep brain stimulation electrode localization and connectomic neuroimaging.☆96Updated this week
- A Package for Quantitative Analysis of Dynamic Contrast-Enhanced Magnetic Resonance Imaging☆8Updated 2 years ago
- (Stereotatic ElectroEncephalography Kit) Run reconstruction, co-registration, electrode localization and surface/atlas rendering for iEEG…☆18Updated 3 years ago
- ☆34Updated 2 years ago
- Simple bash script that downloads and installs ANTs in a unix environment☆13Updated 9 months ago
- defacing utility for MRI images☆113Updated last year
- Automated Fiber Quantification☆76Updated 10 months ago
- A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.☆37Updated last year
- Automated brain PET analysis pipeline☆27Updated last year