Alternatives and similar repositories for ensembl-webcode

Users that are interested in ensembl-webcode are comparing it to the libraries listed below

• Ensembl / ensembl
  The Ensembl Core Perl API and SQL schema
  ☆82Updated 3 weeks ago
• Ensembl / ensembl-rest
  Language agnostic RESTful data access to Ensembl data over HTTP
  ☆149Updated 2 weeks ago
• jwintersinger / kablammo
  Interactive, web-based BLAST results visualization tool. Accessible at https://kablammo.wasmuthlab.org.
  ☆67Updated 3 years ago
• dib-lab / dammit
  just annotate it, dammit!
  ☆93Updated 2 years ago
• galaxyproject / admin-training
  Galaxy Admin Training
  ☆60Updated 10 months ago
• biologyguy / BuddySuite
  Bioinformatics toolkits for manipulating sequence, alignment, and phylogenetic tree files
  ☆128Updated 3 years ago
• dzerbino / oases
  De novo transcriptome assembler for short reads
  ☆64Updated 7 years ago
• usegalaxy-eu / ena-upload-cli
  ENA upload cli - script your Open Data upload to the European Nucleotide Archive
  ☆28Updated 2 months ago
• GMOD / Apollo
  Genome annotation editor with a Java Server backend and a Javascript client that runs in a web browser as a JBrowse plugin.
  ☆136Updated 4 months ago
• LANL-Bioinformatics / EDGE
  EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.
  ☆75Updated 3 weeks ago
• charite / jannovar
  Annotation of VCF variants with functional impact and from databases (executable+library)
  ☆63Updated this week
• DECIPHER-genomics / Genoverse
  HTML5 scrollable genome browser
  ☆111Updated 2 years ago
• dasmoth / dalliance
  Interactive web-based genome browser.
  ☆227Updated 6 years ago
• bio-tools / ToolDog
  Generating tool descriptors from bio.tools
  ☆10Updated 7 years ago
• neufeld / pandaseq
  PAired-eND Assembler for DNA sequences
  ☆137Updated 4 years ago
• Ensembl / ensembl-variation
  The Ensembl Variation Perl API and SQL schema
  ☆30Updated last week
• galaxyproject / planemo
  Command-line utilities to assist in developing Galaxy and Common Workflow Language artifacts - including tools, workflows, and training m…
  ☆95Updated this week
• ewels / clusterflow
  A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.
  ☆98Updated 2 years ago
• GenomicsStandardsConsortium / mixs
  Minimum Information about any (X) Sequence” (MIxS) specification
  ☆53Updated this week
• maasha / biopieces
  Biopieces is a bioinformatic framework of tools easily used and easily created.
  ☆142Updated 7 years ago
• SciLifeLab / Sarek
  Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing
  ☆133Updated 5 years ago
• Phelimb / BIGSI
  BItsliced Genomic Signature Index - Efficient indexing and search in very large collections of WGS data
  ☆125Updated 2 years ago
• Ensembl / ensembl-compara
  The Ensembl Compara Perl API and SQL schema
  ☆54Updated this week
• frankMusacchia / Annocript
  Annocript is a pipeline for the annotation of de-novo generated transcriptomes. It executes BLAST analysis with UniProt, NCBI Conserved …
  ☆56Updated 5 years ago
• ga4gh / vrs
  Extensible specification for representing and uniquely identifying biological sequence variation
  ☆94Updated last week
• OBF / GSoC
  OBF Google Summer of Code
  ☆21Updated 8 months ago
• andyrimmer / Platypus
  Platypus Variant Caller
  ☆108Updated last year
• stevekm / nextflow-demos
  Example Nextflow pipelines and programming techniques
  ☆106Updated last month
• stevetsa / awesome-microbes
  List of computational resources for analyzing microbial sequencing data.
  ☆67Updated 4 months ago
• biocore / redbiom
  Sample search by metadata and features
  ☆47Updated 2 years ago