Skull stripping and brain tissue segmentation
☆121Apr 17, 2019Updated 7 years ago
Alternatives and similar repositories for s3
Users that are interested in s3 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Preprocessing pipeline on Brain MR Images through FSL and ANTs, including registration, skull-stripping, bias field correction, enhanceme…☆210May 15, 2018Updated 8 years ago
- CONSNet: Convolutional Neural Networks for Skull-stripping in Brain MR Imaging using Consensus-based Silver Standard Masks☆17Jul 24, 2019Updated 7 years ago
- Deep learning based skull stripping and FLAIR abnormality segmentation in brain MRI using U-Net☆129Nov 21, 2019Updated 6 years ago
- Learning joint Segmentation of Tissues And Brain Lesions (jSTABL) from task-specific hetero-modal domain-shifted datasets☆13Mar 24, 2025Updated last year
- Deep Learning tools for brain medical images☆142Jul 27, 2024Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- [Nature Communications 2025] Official repository for "Glioma Radiotherapy Design by Optimization of a Data and Physics Informed Discrete …☆35Jun 24, 2026Updated 2 months ago
- ACEnet: Anatomical Context-Encoding Network for Neuroanatomy Segmentation☆16Feb 14, 2022Updated 4 years ago
- Grand Challenge on MR Brain Segmentation at MICCAI 2018 - MISPL☆23Apr 3, 2019Updated 7 years ago
- A fork of the official TPU models repo with fixes and a solution of the Kaggle Open Images 2019 Object Detection Challenge☆49Oct 15, 2019Updated 6 years ago
- Solver for simulating tumor growth and mass effect in patient brain anatomy☆29Jan 7, 2025Updated last year
- Implemented algorithms for segmenting the brain in 3 segments, namely, (i) white matter, (ii) gray matter, and (iii) cerebrospinal fluid,…☆10Oct 31, 2022Updated 3 years ago
- Demos for Cell Proposal Networks presented in ICIP 16 and DLMIA 16 (MICCAI-W)☆17May 9, 2017Updated 9 years ago
- A barebones (Distil)BERT pipeline for token classification tasks driven by catalyst☆13Oct 14, 2019Updated 6 years ago
- 3D Unet biomedical segmentation model powered by tensorpack with fast io speed☆201Oct 8, 2018Updated 7 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Tumor growth modeling toolkit. Tumor growth numerical solvers.☆17Oct 13, 2025Updated 10 months ago
- Sberbank Data Science Jorney Auto-ML competition☆29Dec 26, 2018Updated 7 years ago
- Automated deep-learning based brain extraction applicable to a broad range of MRI sequence types and with robust performance even in the …☆40Jul 14, 2021Updated 5 years ago
- Perona-Malik diffusion or anisotropic diffusion is a computer vision filtering technique that aims at reducing image noise without reduci…☆12Sep 20, 2015Updated 10 years ago
- Direct volume rendering with WebGL 2.☆12Jun 8, 2026Updated 2 months ago
- MRI brain extraction tool☆433Dec 18, 2024Updated last year
- Code for corresponding MIDL2020 paper☆18May 17, 2020Updated 6 years ago
- Brain Extraction Tool in Python☆45May 13, 2026Updated 3 months ago
- Code examples of the free course in Youtube of brain MRI preprocessing techniques in python☆75Jan 6, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Python code used to model the variation in TCP and NTCP with dose fraction specific dose variations☆11Apr 18, 2023Updated 3 years ago
- 3D Medical Image Semantic Segmentation☆13Aug 17, 2018Updated 8 years ago
- 3d unet + vae, repoduce brats2018 winner solution☆117Aug 22, 2019Updated 7 years ago
- ☆12Nov 16, 2020Updated 5 years ago
- The purpose of this project is to be able to automatically and efficiently segment and classify high-grade and low-grade gliomas.☆16Feb 27, 2019Updated 7 years ago
- The project is used to do preprocessing on brain MR images by using Nipype.☆40Jun 18, 2024Updated 2 years ago
- Normalize MR image intensities in Python☆340Aug 4, 2026Updated 3 weeks ago
- Plotting 4 brain surface views on a single matplotlib figure☆12Dec 3, 2021Updated 4 years ago
- #BRATS2015 #BRATS2018 #deep learning #fully automatic brain tumor segmentation #U-net # tensorflow #Keras☆54May 7, 2019Updated 7 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- My 3rd place solution to the OpenKBP 2020 Competition☆13Jun 11, 2020Updated 6 years ago
- [MICCAI2022] Estimating Model Performance under Domain Shifts with Class-Specific Confidence Scores.☆12Jun 7, 2024Updated 2 years ago
- ☆15Jun 1, 2021Updated 5 years ago
- Keras implementation of layer which performs augmentations of images using GPU.☆49Oct 6, 2021Updated 4 years ago
- We provide DeepMedic and 3D UNet in pytorch for brain tumore segmentation. We also integrate location information with DeepMedic and 3D U…☆162Sep 10, 2018Updated 7 years ago
- [BrainLes2019] Multi-step cascaded network for brain tumor segmentations (tensorflow)☆99Nov 21, 2022Updated 3 years ago
- Segmentation of prostate from MRI scans☆45Jul 1, 2021Updated 5 years ago