Alternatives and similar repositories for cryodrgn

Users that are interested in cryodrgn are comparing it to the libraries listed below

• phonchi / Computational-CryoEM
  A curated list of awesome computational cryo-EM methods.
  ☆126Updated 3 months ago
• geoffwoollard / learn_cryoem_math
  ☆123Updated last week
• 3dem / model-angelo
  Automatic atomic model building program for cryo-EM maps
  ☆138Updated last month
• zhonge / cryodrgn_empiar
  ☆30Updated 4 years ago
• kuixu / awesome-cryoem
  A collaborative list of awesome CryoEM (Cryo Electron Microscopy) resources.
  ☆145Updated 4 years ago
• cryoem / eman2
  A scientific image processing software suite with a focus on CryoEM and CryoET
  ☆157Updated this week
• phonchi / Computational-CryoET
  A curated list of awesome computational cryo-ET methods.
  ☆60Updated 8 months ago
• jasonkyuyim / se3_diffusion
  Implementation for SE(3) diffusion model with application to protein backbone generation
  ☆385Updated last year
• compSPI / cryoAI
  ☆43Updated last year
• tbepler / topaz
  Pipeline for particle picking in cryo-electron microscopy images using convolutional neural networks trained from positive and unlabeled …
  ☆189Updated last week
• asarnow / pyem
  Python programs for electron microscopy
  ☆121Updated 3 weeks ago
• jonathanking / sidechainnet
  An all-atom protein structure dataset for machine learning.
  ☆353Updated last year
• bjing2016 / alphaflow
  AlphaFold Meets Flow Matching for Generating Protein Ensembles
  ☆449Updated 5 months ago
• FreyrS / dMaSIF
  ☆212Updated 2 years ago
• luost26 / diffab
  ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)
  ☆328Updated last year
• drorlab / gvp
  Geometric Vector Perceptron --- a rotation-equivariant GNN for learning from biomolecular structure
  ☆146Updated 4 years ago
• microsoft / protein-frame-flow
  Fast protein backbone generation with SE(3) flow matching.
  ☆267Updated 11 months ago
• baker-laboratory / rf_diffusion_all_atom
  Public RFDiffusionAA repo
  ☆403Updated 11 months ago
• arneschneuing / DiffSBDD
  A Euclidean diffusion model for structure-based drug design.
  ☆428Updated 4 months ago
• cramerlab / warp
  ☆54Updated last year
• microsoft / foldingdiff
  Diffusion models of protein structure; trigonometry and attention are all you need!
  ☆545Updated last year
• drorlab / gvp-pytorch
  Geometric Vector Perceptrons --- a rotation-equivariant GNN for learning from biomolecular structure
  ☆282Updated 2 years ago
• ml-struct-bio / CryoBench
  Diverse and challenging datasets for the heterogeneity problem in cryo-EM
  ☆31Updated 2 months ago
• rsanchezgarc / deepEMhancer
  Deep learning for cryo-EM maps post-processing
  ☆53Updated last month
• HannesStark / EquiBind
  EquiBind: geometric deep learning for fast predictions of the 3D structure in which a small molecule binds to a protein
  ☆510Updated 4 months ago
• octavian-ganea / equidock_public
  EquiDock: geometric deep learning for fast rigid 3D protein-protein docking
  ☆243Updated last year
• ml-struct-bio / cryofire
  Amortized inference for ab initio heterogeneous cryo-EM reconstruction
  ☆37Updated 2 years ago
• LPDI-EPFL / masif
  MaSIF- Molecular surface interaction fingerprints. Geometric deep learning to decipher patterns in molecular surfaces.
  ☆660Updated last year
• alncat / opusDSD
  deep structural disentanglement
  ☆38Updated 2 months ago
• RosettaCommons / protein_generator
  Joint sequence and structure generation with RoseTTAFold sequence space diffusion
  ☆311Updated 7 months ago