cerr / pyCERR
Computational Environment for Radiological Research
☆20Updated last week
Alternatives and similar repositories for pyCERR:
Users that are interested in pyCERR are comparing it to the libraries listed below
- PyRaDiSe: A Python package for DICOM-RT-based auto-segmentation pipeline construction and DICOM-RT data conversion☆49Updated this week
- DICOM RT-Struct to mask☆101Updated last year
- Model Zoo for parameter settings in Elastix, ITKElastix and SimpleElastix☆51Updated last month
- PYthon Dicom Image ConvertER☆28Updated last month
- Software for automatic segmentation and generation of standardized clinical reports of brain tumors from MRI volumes☆38Updated this week
- BOA is a segmentation tool of CT scans by the SHIP-AI group (https://ship-ai.ikim.nrw/). Combining the TotalSegmentator and the Body Comp…☆34Updated 7 months ago
- Transparent and reproducible medical image processing pipelines in Python.☆46Updated last week
- Automated VMAT Planning [PMB'21, PMB'23]☆18Updated last month
- Tools to help with the conversion of DICOM images, RT Structures, and dose to useful Python objects. Essentially DICOM to NumPy and Simpl…☆98Updated 5 months ago
- Domain knowledge driven 3D radiation dose prediction [PMB'22]☆45Updated 3 weeks ago
- TotalSegmentator packaged as an AIDE Application, based on the MONAI Application Package (MAP) standard.☆25Updated last year
- Develop plan optimization models for knowledge-based planning in radiotherapy☆17Updated 4 months ago
- Stores the MHub models dockerfiles and scripts.☆9Updated last week
- Processing Library and Analysis Toolkit for Medical Imaging in Python☆132Updated 3 weeks ago
- The easiest tool for experimenting with radiomics features.☆40Updated last year
- Auto-segmentation Deep Learning Toolbox for radiotherapy☆13Updated 3 years ago
- Fully automatic coronary calcium risk assessment using Deep Learning.☆38Updated 3 years ago
- A deep learning framework for automated analysis of body composition from abdominal CT☆18Updated 11 months ago
- Workflow for Optimal Radiomics Classification☆74Updated 2 months ago
- Generative Adversarial Networks for Computationally Efficient Radiotherapy☆49Updated 2 years ago
- RadQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) and computed tomography (C…☆98Updated this week
- Medical Image Radiomics Processor☆67Updated last month
- Compressed Radiation Treatment Planning [NeurIPS'24, MP'2025, PMB'23]☆13Updated last month
- Precision medicine toolbox☆69Updated last year
- A 3D Slicer extension for efficient segmentation with nnInteractive.☆49Updated last week
- XDRT (XDR Toolkit) is a python toolkit to work with the Elekta XDR and XVI file formats.☆17Updated 2 weeks ago
- End-to-end Python CT volume preprocessing pipeline to convert raw DICOMs into clean 3D numpy arrays for ML. From paper Draelos et al. "Ma…☆65Updated 4 years ago
- Physics-based data augmentation library for quantifying CT and CBCT images in radiotherapy [PMB'23, PMB'21, Medical Physics'21, AAPM'21]☆63Updated 2 years ago
- ☆110Updated 3 months ago
- A Python script to calculate dose volume histogram (DVH) from DICOM RT Structure data☆32Updated 3 years ago