cerr / pyCERR
Computational Environment for Radiological Research
☆18Updated 2 weeks ago
Alternatives and similar repositories for pyCERR:
Users that are interested in pyCERR are comparing it to the libraries listed below
- PyRaDiSe: A Python package for DICOM-RT-based auto-segmentation pipeline construction and DICOM-RT data conversion☆49Updated 3 months ago
- DICOM RT-Struct to mask☆101Updated last year
- BOA is a segmentation tool of CT scans by the SHIP-AI group (https://ship-ai.ikim.nrw/). Combining the TotalSegmentator and the Body Comp…☆32Updated 5 months ago
- Model Zoo for parameter settings in Elastix, ITKElastix and SimpleElastix☆50Updated 2 weeks ago
- Medical Image Radiomics Processor☆63Updated this week
- PYthon Dicom Image ConvertER☆26Updated 2 weeks ago
- Stores the MHub models dockerfiles and scripts.☆9Updated last month
- The easiest tool for experimenting with radiomics features.☆40Updated 10 months ago
- Processing Library and Analysis Toolkit for Medical Imaging in Python☆125Updated last week
- Workflow for Optimal Radiomics Classification☆74Updated 3 weeks ago
- Software for automatic segmentation and generation of standardized clinical reports of brain tumors from MRI volumes☆37Updated last month
- TotalSegmentator packaged as an AIDE Application, based on the MONAI Application Package (MAP) standard.☆25Updated last year
- Generative Adversarial Networks for Computationally Efficient Radiotherapy☆49Updated 2 years ago
- Transparent and reproducible medical image processing pipelines in Python.☆44Updated last week
- Tools to help with the conversion of DICOM images, RT Structures, and dose to useful Python objects. Essentially DICOM to NumPy and Simpl…☆98Updated 3 months ago
- A project to provide custom sorting and renaming of dicom files☆77Updated 8 months ago
- Brain extraction in presence of abnormalities, using single and multiple MRI modalities☆34Updated last week
- Domain knowledge driven 3D radiation dose prediction [PMB'22]☆43Updated this week
- This repository employs a deep-learning method for the automated segmentation of total metabolic tumor volume (TMTV) in whole-body [18]F-…☆19Updated 3 weeks ago
- Precision medicine toolbox☆69Updated 11 months ago
- Airway segmentation from chest CTs using deep Convolutional Neural Networks☆67Updated 9 months ago
- Computed tomography to body composition (Comp2Comp).☆71Updated 2 months ago
- A deep learning framework for automated analysis of body composition from abdominal CT☆19Updated 10 months ago
- Automated VMAT Planning [PMB'21, PMB'23]☆15Updated 2 weeks ago
- Physics-based data augmentation library for quantifying CT and CBCT images in radiotherapy [PMB'23, PMB'21, Medical Physics'21, AAPM'21]☆63Updated last year
- Fully automatic coronary calcium risk assessment using Deep Learning.☆38Updated 3 years ago
- Automatic Radiotherapy Treatment Planning , Knowledge-Based Planning , Dose Prediction , Cascade 3D Network (C3D) ,DCNN, Head and Neck ,…☆17Updated 4 years ago
- Automatic classification of tertiary bronchi based on bronchus masks using a rule-based approach.☆40Updated 2 years ago
- Structure and position aware graph neural network for airway labeling☆14Updated 3 years ago
- Compressed Radiation Treatment Planning [NeurIPS'24, PMB'23]☆11Updated 3 months ago