wellcometrust / WellcomeML
Retired repository for Machine Learning utils at the Wellcome Trust (now deprecated).
☆31Updated last year
Alternatives and similar repositories for WellcomeML:
Users that are interested in WellcomeML are comparing it to the libraries listed below
- A repository for brainstorming and prototyping ideas related to the eLifeSprint project Annotate them all (https://sprint.elifesciences.o…☆15Updated 3 years ago
- NCATS Biomedical Translator Reasoners Standard API☆36Updated 4 months ago
- An experimental ontology containing key terms from Open Biological and Biomedical Ontologies (OBO)☆40Updated this week
- python library for working with ontologies and ontology associations☆124Updated last week
- DEPRECATED: replaced by linkml☆23Updated 3 years ago
- The symptom ontology was designed around the guiding concept of a symptom being: “A perceived change in function, sensation or appearance…☆39Updated 8 months ago
- Tool that converts between BioC XML files and BioC JSON files☆16Updated 8 years ago
- Integrated OBO ontology store☆44Updated 3 months ago
- NetworkX-based Python library for representing ontologies☆84Updated last year
- ☆15Updated 2 years ago
- A collection of metadata, tools, and files associated with the Gene Ontology public web presence.☆46Updated 2 weeks ago
- KGX is a Python library for exchanging Knowledge Graphs☆117Updated last month
- Wellcome tool to parse references scraped from policy documents using machine learning☆25Updated 3 years ago
- ☆23Updated 2 years ago
- A Database-based knowledge back-end built on and for INDRA. The INDRA Database is a service that can be set up by any user with their own…☆16Updated 3 weeks ago
- NLP pipeline software using common workflow language☆34Updated 5 years ago
- Generating graph structures from OWL ontologies☆12Updated 7 years ago
- Platform enabling Rapid Annotation for Clinical Entity Recognition☆50Updated 2 years ago
- ☆66Updated 2 years ago
- A convolutional neural network model for relation extraction.☆13Updated last year
- An instance of KG Hub to produce a knowledge graph for COVID-19 response.☆80Updated last year
- API for linked biological knowledge☆64Updated 2 years ago
- 📖 Generation and Applications of Knowledge Graphs in Systems and Networks Biology☆29Updated 5 years ago
- Softcite software mention recognizer, finding mentions and citations to software from within the academic literature☆72Updated 3 months ago
- Web interface that allows users to perform computer-assisted text annotation☆16Updated 2 years ago
- A collection of useful python functions for looking up information and working with the Biolink Model☆21Updated 6 months ago
- Map your disease and phenotype terms to the Open Targets platform ontology☆21Updated 3 months ago
- The Ontology for Biomedical Investigations☆76Updated this week
- Neuro Behaviour Ontology: an ontology for human and animal behaviour processes and behaviour phenotypes☆25Updated last year
- Resources for grounding protein families and complexes from text and describing their hierarchical relationships.☆18Updated 7 months ago