wellcometrust / WellcomeML
Retired repository for Machine Learning utils at the Wellcome Trust (now deprecated).
☆31Updated last year
Alternatives and similar repositories for WellcomeML:
Users that are interested in WellcomeML are comparing it to the libraries listed below
- A repository for brainstorming and prototyping ideas related to the eLifeSprint project Annotate them all (https://sprint.elifesciences.o…☆15Updated 3 years ago
- DEPRECATED: replaced by linkml☆23Updated 3 years ago
- Tool that converts between BioC XML files and BioC JSON files☆16Updated 8 years ago
- Wellcome tool to parse references scraped from policy documents using machine learning☆25Updated 3 years ago
- API for linked biological knowledge☆64Updated 2 years ago
- python library for working with ontologies and ontology associations☆128Updated last month
- NCATS Biomedical Translator Reasoners Standard API☆36Updated 5 months ago
- WG3 Metadata Specification☆28Updated 6 years ago
- KnetMiner - webapp to search and visualize genome-scale knowledge graphs☆25Updated 2 weeks ago
- ☆66Updated 2 years ago
- Platform enabling Rapid Annotation for Clinical Entity Recognition☆50Updated 2 years ago
- NLP pipeline software using common workflow language☆34Updated 5 years ago
- A Database-based knowledge back-end built on and for INDRA. The INDRA Database is a service that can be set up by any user with their own…☆16Updated last week
- NetworkX-based Python library for representing ontologies☆85Updated last year
- KGX is a Python library for exchanging Knowledge Graphs☆119Updated 2 months ago
- Integrated OBO ontology store☆44Updated last month
- Python library for working with BioC files☆13Updated 7 years ago
- Softcite software mention recognizer, finding mentions and citations to software from within the academic literature☆75Updated 5 months ago
- Machine-learning based pipeline relying on LambdaMART currently used in PubMed for relevance (Best Match) searches☆40Updated 6 years ago
- API providing access to papers and authors scraped from biorxiv.org☆58Updated 2 years ago
- Generating graph structures from OWL ontologies☆12Updated 7 years ago
- Alignment, a collaborative, system aided, user driven ontology/vocabulary matching and validation platform.☆12Updated 2 years ago
- A curated list of awesome resources for COVID-19☆37Updated 4 years ago
- modification of bibliotools 2.2 from Sébastian Grauwin☆11Updated 5 years ago
- Basic and Advanced OBO Graphs: specification and reference implementation☆64Updated 3 months ago
- An experimental ontology containing key terms from Open Biological and Biomedical Ontologies (OBO)☆40Updated last month
- Open Access PDF harvester☆39Updated 10 months ago
- User-friendly extensions to the Disease Ontology☆20Updated 8 years ago
- The symptom ontology was designed around the guiding concept of a symptom being: “A perceived change in function, sensation or appearance…☆41Updated 10 months ago
- Web interface that allows users to perform computer-assisted text annotation☆16Updated 2 years ago