wanderine / nnunetdocker
☆14Updated 4 years ago
Alternatives and similar repositories for nnunetdocker:
Users that are interested in nnunetdocker are comparing it to the libraries listed below
- Convert numpy mask to dicom rtstruct☆12Updated 2 years ago
- Python package for DICOM-SEG medical segmentation file reading and writing☆85Updated last year
- TotalSegmentator packaged as an AIDE Application, based on the MONAI Application Package (MAP) standard.☆25Updated last year
- Generative Adversarial Networks for Computationally Efficient Radiotherapy☆49Updated 2 years ago
- Pytorch implementation of the paper Iterative fully convolutional neural networks for automatic vertebra segmentation accepted in MIDL201…☆63Updated last year
- DICOM RT-Struct to mask☆101Updated last year
- Auto-segmentation Deep Learning Toolbox for radiotherapy☆13Updated 3 years ago
- Tools to help with the conversion of DICOM images, RT Structures, and dose to useful Python objects. Essentially DICOM to NumPy and Simpl…☆98Updated 3 months ago
- 💥 Command line tool for automatic liver parenchyma and liver vessel segmentation in CT using a pretrained deep learning model☆66Updated 5 months ago
- PYthon Dicom Image ConvertER☆26Updated 2 weeks ago
- PyRaDiSe: A Python package for DICOM-RT-based auto-segmentation pipeline construction and DICOM-RT data conversion☆49Updated 3 months ago
- A project to provide custom sorting and renaming of dicom files☆77Updated 8 months ago
- General deep learning-based fast image registration framework for clinical thoracic 4D CT data☆40Updated 6 years ago
- Software for automatic segmentation and generation of standardized clinical reports of brain tumors from MRI volumes☆37Updated last month
- Learning Deformable Registration of Medical Images with Anatomical Constraints☆23Updated last year
- Transparent and reproducible medical image processing pipelines in Python.☆44Updated last week
- BOA is a segmentation tool of CT scans by the SHIP-AI group (https://ship-ai.ikim.nrw/). Combining the TotalSegmentator and the Body Comp…☆32Updated 5 months ago
- Docker for running stroke lesion core segmentation☆29Updated 4 years ago
- Robust Brain Extraction Tool for CT Head Images☆45Updated 4 years ago
- Processing Library and Analysis Toolkit for Medical Imaging in Python☆125Updated last week
- Brain vessel segmentation using 3D convolutional neural networks☆42Updated 2 years ago
- The easiest tool for experimenting with radiomics features.☆40Updated 10 months ago
- ☆45Updated last year
- 3D-Unet: patched based Pytorch implementation for medical images segmentation☆63Updated 3 years ago
- A segmentation network for intracranial aneurysm on CTA images using pytorch☆41Updated 2 years ago
- Maximum intensity projection for medical image☆21Updated 7 years ago
- XDRT (XDR Toolkit) is a python toolkit to work with the Elekta XDR and XVI file formats.☆16Updated 9 months ago
- This repository supports the BENDER series of videos for the MICCAI Education Challenge, 2022.☆12Updated last year
- ☆66Updated 11 months ago
- This repository contains the code used for the paper "Towards automated brain aneurysm detection in TOF-MRA: open data, weak labels, and …☆31Updated 2 years ago