kkiser1 / Autosegmentation-Spatial-Similarity-MetricsLinks
Code for calculating the added path length, false negative path length, and false negative volume..
☆11Updated 5 years ago
Alternatives and similar repositories for Autosegmentation-Spatial-Similarity-Metrics
Users that are interested in Autosegmentation-Spatial-Similarity-Metrics are comparing it to the libraries listed below
Sorting:
- ☆149Updated 9 months ago
- DICOM RT-Struct to mask☆101Updated last year
- Hierarchical probabilistic 3D U-Net, with attention mechanisms (—𝘈𝘵𝘵𝘦𝘯𝘵𝘪𝘰𝘯 𝘜-𝘕𝘦𝘵, 𝘚𝘌𝘙𝘦𝘴𝘕𝘦𝘵) and a nested decoder str…☆43Updated 3 years ago
- ISBI2022: An Improved Deep Learning Framework for MR-to-CT Image Synthesis with a New Hybrid Objective Function.☆12Updated 3 years ago
- ☆50Updated last month
- Lesion and prostate masks for the PROSTATEx training dataset, after a lesion-by-lesion quality check.☆83Updated 2 years ago
- Implemention of the Paper "MultiTalent: A Multi-Dataset Approach to Medical Image Segmentation"☆59Updated last month
- ☆68Updated last year
- MedIA 2025 | A-Eval: A Benchmark for Cross-Dataset and Cross-Modality Evaluation of Abdominal Multi-Organ Segmentation☆29Updated 4 months ago
- End-to-end Python CT volume preprocessing pipeline to convert raw DICOMs into clean 3D numpy arrays for ML. From paper Draelos et al. "Ma…☆69Updated 4 years ago
- COSTA: A Multi-center Multi-vendor TOF-MRA Dataset and A Novel Cerebrovascular Segmentation Network☆28Updated 10 months ago
- code for paper Positional Contrastive Learning for Volumetric Medical Image Segmentation☆59Updated 9 months ago
- This repository employs a deep-learning method for the automated segmentation of total metabolic tumor volume (TMTV) in whole-body [18]F-…☆23Updated 3 months ago
- The Centerline-Cross Entropy Loss for Vessel-Like Structure Segmentation: Better Topology Consistency Without Sacrificing Accuracy☆12Updated 8 months ago
- MICCAI 2024/2025: nnUNet incorporating additional baselines as SAMed️, Mamba Variants, and MedNeXT to establish a benchmark for segmentat…☆91Updated 3 weeks ago
- Preprocessing scripts: from dicom to aligned nitfy for SynthRAD2023 Grand Challenge☆64Updated 2 years ago
- [MICCAI 2024] Centerline Boundary Dice Loss for Vascular Segmentation☆63Updated 5 months ago
- One-line code to get SoTA pre-trained Medical Image Models ready in PyTorch.☆38Updated 2 months ago
- PyTorch implementation of a multi-task, weak supervision framework for abnormality localization in large, volumetric images.☆22Updated 2 years ago
- A python (Pytorch) implementation of Beam Dose Decomposition for Dose Prediction [MICCAI 2022]☆24Updated last year
- new and more efficient version for 3D discrete deformable registration, reaching the highest accuracy in several benchmarks☆108Updated last year
- autoPET TCIA pipeline☆50Updated 3 years ago
- [MICCAI2024] Rethinking Abdominal Organ Segmentation (RAOS) in the clinical scenario: A robustness evaluation benchmark with challenging …☆44Updated 10 months ago
- [MICCAI'22] What Makes for Automatic Reconstruction of Pulmonary Segments☆22Updated 4 months ago
- MSHub: Medical Image Segmentation Hub with Pre-trained nnUNets☆23Updated 3 months ago
- ☆47Updated last year
- ☆43Updated 2 months ago
- NexToU: Efficient Topology-Aware U-Net for Medical Image Segmentation☆71Updated 4 months ago
- 🏆1st place in the PANORAMA challenge (early detection of PDAC on contrast-enhanced CT)☆11Updated 3 months ago
- The official implementation of "Joint Modeling of Image and Label Statistics for Enhancing Model Generalizability of Medical Image Segmen…☆40Updated 2 years ago