☆11Oct 25, 2023Updated 2 years ago
Alternatives and similar repositories for kinase_Aloop
Users that are interested in kinase_Aloop are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Kincore-Standalone2 - Python3 code for calculating the conformational state of typical protein kinases☆18Sep 18, 2023Updated 2 years ago
- Repository for MD methods and analysis from submitted or published work☆20Jun 10, 2023Updated 3 years ago
- Statistical models for biomolecular dynamics☆44May 8, 2025Updated last year
- ☆13Feb 20, 2024Updated 2 years ago
- ☆72Feb 13, 2026Updated 6 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Boltzmann-ranked alternative protein conformations from reduced-MSA AlphaFold2☆63Aug 5, 2026Updated last week
- Examples and data for performing path similarity analysis (PSA).☆18Oct 23, 2015Updated 10 years ago
- ☆10Oct 27, 2024Updated last year
- ☆15Apr 7, 2022Updated 4 years ago
- Robust and stable clustering of molecular dynamics simulation trajectories.☆20Sep 2, 2022Updated 3 years ago
- Enhanced sampling methods for molecular dynamics simulations☆46Dec 16, 2022Updated 3 years ago
- Graph Attention Site Prediction (GrASP): Identifying Druggable Binding Sites Using Graph Neural Networks with Attention☆64Mar 3, 2026Updated 5 months ago
- Reweighted Autoencoded Variational Bayes for Enhanced Sampling (RAVE)☆44May 3, 2020Updated 6 years ago
- A Tutorial for quasi Markov State Model(qMSM) developed by Huang Group, Dept of Chemistry at UW-Madison☆19Jun 6, 2023Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Set of tools to generate a multi-eGO force field to perform molecular dynamics simulations☆16Updated this week
- Flow-matching for coarse graining of miniproteins.☆20Nov 18, 2022Updated 3 years ago
- Weighted Ensemble Data Analysis and Plotting☆27Jul 17, 2026Updated 3 weeks ago
- Best practice document for alchemical free energy calculations going to livecoms journal☆90May 28, 2026Updated 2 months ago
- ☆15Jun 11, 2024Updated 2 years ago
- Spectral Gap Optimization of Parameters☆18Mar 28, 2020Updated 6 years ago
- PathIntegrate Python package for pathway-based multi-omics data integration☆19Nov 9, 2024Updated last year
- Conformational sampling for highly flexible proteins☆15Jan 31, 2025Updated last year
- Comprehensive Benchmark for Protein-Peptide Complex Structure Prediction with AlphaFold3☆19Sep 4, 2025Updated 11 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A mixture density network, by PyTorch, for scikit-learn☆26Feb 27, 2026Updated 5 months ago
- Main repository for METAGUI3☆22Jun 19, 2021Updated 5 years ago
- A Python module for carrying out GCMC insertions and deletions of water molecules in OpenMM.☆75Jun 12, 2023Updated 3 years ago
- COSMO: COarse-grained Simulation of intrinsically disordered prOteins with openMM☆15Jul 14, 2026Updated last month
- ☆18Jul 26, 2024Updated 2 years ago
- ☆23Dec 11, 2024Updated last year
- ☆13Jul 5, 2024Updated 2 years ago
- MIT 20.S947 course on 3D scientific rendering☆42Apr 7, 2024Updated 2 years ago
- Supporting data for the manuscript "Deep learning the slow modes for rare events sampling"☆23Jun 6, 2024Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- This repo contains code for creating a Birds Classifier and an API where the user can upload a birds image and gets the according species…☆11Sep 18, 2022Updated 3 years ago
- ☆13Jul 17, 2025Updated last year
- ☆19Nov 21, 2022Updated 3 years ago
- Deep Boosted Molecular Dynamics☆13Aug 27, 2024Updated last year
- ☆12Nov 17, 2023Updated 2 years ago
- Thermodynamically Explainable Representations of AI and other black-box Paradigms☆34Nov 3, 2024Updated last year
- Awesome papers related to generative flow matching and its applications in bioinformatics. (Nature Machine Intelligence)☆47Apr 24, 2026Updated 3 months ago