slowikj / seqR

Related projects ⓘ

Alternatives and complementary repositories for seqR

• BioGenies / tidysq
  tidy processing of biological sequences in R
  ☆39Updated 3 weeks ago
• lcolladotor / biocthis
  Automate package and project setup for Bioconductor packages
  ☆50Updated 6 months ago
• fkeck / bioseq
  A Toolbox for Manipulating Biological Sequences in R
  ☆20Updated 2 years ago
• emmanuelparadis / ape
  analysis of phylogenetics and evolution
  ☆53Updated last week
• YuLab-SMU / tidytree
  A Tidy Tool for Phylogenetic Tree Data Manipulation
  ☆53Updated 3 months ago
• federicomarini / pcaExplorer
  pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data
  ☆55Updated last month
• kassambara / fastqcr
  fastqcr: Quality Control of Sequencing Data
  ☆68Updated last year
• Bioconductor / Biostrings
  Efficient manipulation of biological strings
  ☆57Updated 2 weeks ago
• gladkia / igvShiny
  An htmlwidget version of igv, for RStudio and Shiny apps
  ☆36Updated last week
• igordot / msigdbr
  MSigDB gene sets for multiple organisms in a tidy data format
  ☆70Updated last year
• drostlab / metablastr
  Seamless Integration of BLAST Sequence Searches in R
  ☆31Updated last year
• Bioconductor / basilisk
  Clone of the Bioconductor repository for the basilisk package.
  ☆27Updated 3 weeks ago
• csoneson / ExploreModelMatrix
  Explore design matrices interactively with R/Shiny
  ☆36Updated 2 weeks ago
• stemangiola / tidySummarizedExperiment
  Brings SummarizedExperiment to the tidyverse
  ☆25Updated 5 months ago
• Bioconductor / GenomicRanges
  Representation and manipulation of genomic intervals
  ☆45Updated last week
• gosling-lang / grosling
  R interface to 'Gos'
  ☆35Updated last year
• Bioconductor / SummarizedExperiment
  A container (S4 class) for matrix-like assays
  ☆33Updated 3 weeks ago
• swsoyee / TCC-GUI
  📊 Graphical User Interface for TCC package
  ☆44Updated 8 months ago
• stemangiola / bioc_2020_tidytranscriptomics
  Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap
  ☆26Updated 4 years ago
• waldronlab / ProjectAsPackage
  Demonstration of the use of an R package to organize a data analysis project
  ☆21Updated 4 years ago
• abbvie-external / OmicNavigator
  Open-Source Software for Omic Data Analysis and Visualization
  ☆33Updated 2 months ago
• rnabioco / valr
  Genome Interval Arithmetic in R
  ☆89Updated last month
• shaunpwilkinson / kmer
  K-mer Counting for Biological Sequence Analysis
  ☆26Updated 5 years ago
• federicomarini / GeneTonic
  Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail
  ☆76Updated last month
• csoneson / treeclimbR
  ☆19Updated 2 weeks ago
• pinin4fjords / shinyngs
  Shiny apps for NGS etc based on reusable components created using Shiny modules
  ☆70Updated 4 months ago
• jbengler / tidyheatmaps
  Heatmaps from Tidy Data
  ☆45Updated 4 months ago
• GMOD / JBrowseR
  R interface to the JBrowse 2 Linear Genome View.
  ☆35Updated 8 months ago
• pcastellanoescuder / POMA
  Omics Data Analysis Tools
  ☆11Updated this week
• shaunpwilkinson / aphid
  Analysis with Profile Hidden Markov Models
  ☆22Updated 4 months ago