antonioguj / bronchinet
Airway segmentation from chest CTs using deep Convolutional Neural Networks
☆66Updated 10 months ago
Alternatives and similar repositories for bronchinet:
Users that are interested in bronchinet are comparing it to the libraries listed below
- Automatic classification of tertiary bronchi based on bronchus masks using a rule-based approach.☆40Updated 2 years ago
- DICOM RT-Struct to mask☆101Updated last year
- NaviAirway: a Bronchiole-sensitive Deep Learning-based Airway Segmentation Pipeline☆50Updated 2 years ago
- new and more efficient version for 3D discrete deformable registration, reaching the highest accuracy in several benchmarks☆105Updated last year
- Lesion and prostate masks for the PROSTATEx training dataset, after a lesion-by-lesion quality check.☆82Updated 2 years ago
- 3D-Unet: patched based Pytorch implementation for medical images segmentation☆63Updated 3 years ago
- 3D airway segmentation method☆60Updated 3 years ago
- This is a 3D Slicer extension for segmentation and spatial reconstruction of infiltrated, collapsed, and emphysematous areas in lung CT.☆77Updated 7 months ago
- 💥 Command line tool for automatic liver parenchyma and liver vessel segmentation in CT using a pretrained deep learning model☆67Updated 6 months ago
- Structure and position aware graph neural network for airway labeling☆14Updated 3 years ago
- Pytorch implementation of the paper Iterative fully convolutional neural networks for automatic vertebra segmentation accepted in MIDL201…☆63Updated last year
- Resources of the paper “Deep Learning to Segment Pelvic Bones: Large-scale CT Datasets and Baseline Models”.☆148Updated 3 years ago
- Implementation of the DeepVesselNet deep learning network☆147Updated last year
- Workflow for Optimal Radiomics Classification☆74Updated 2 months ago
- A Large-Scale Dataset for Spinal Vertebrae Segmentation in Computed Tomography☆168Updated last month
- ☆33Updated last year
- End-to-end Python CT volume preprocessing pipeline to convert raw DICOMs into clean 3D numpy arrays for ML. From paper Draelos et al. "Ma…☆65Updated 4 years ago
- Segmentation deep learning ALgorithm based on MONai toolbox: single and multi-label segmentation software developed by QIMP team-Vienna.☆121Updated 3 years ago
- [MICCAI'22] What Makes for Automatic Reconstruction of Pulmonary Segments☆20Updated 3 months ago
- ☆26Updated last year
- Deep Learning Registration of the Prostate☆54Updated last year
- SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI☆83Updated 4 months ago
- The code of paper "Transformer-based 3D U-Net for Pulmonary Vessel Segmentation and Artery-vein Separation from CT images"☆28Updated last month
- The supplementary code for the pulmonary artery-vein segmentation with various inter-slice thickness☆25Updated last month
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆72Updated 9 months ago
- Automatic Segmentation of Vestibular Schwannoma with MONAI (PyTorch)☆48Updated last year
- Official repository for reproducing COVID and Lung segmentation prediction (old version of MEDPSeg)☆10Updated last year
- ISBI2022: An Improved Deep Learning Framework for MR-to-CT Image Synthesis with a New Hybrid Objective Function.☆11Updated 3 years ago
- ☆78Updated last year
- Annotations for the PI-CAI Challenge: Public Training and Development Dataset☆59Updated 7 months ago