Hierarchical probabilistic 3D U-Net, with attention mechanisms (βππ΅π΅π¦π―π΅πͺπ°π― π-ππ¦π΅, ππππ¦π΄ππ¦π΅) and a nested decoder structure with deep supervision (βπππ¦π΅++). Built in TensorFlow 2.5. Configured for voxel-level clinically significant prostate cancer detection in multi-channel 3D bpMRI scans.
β43Feb 11, 2022Updated 4 years ago
Alternatives and similar repositories for prostateMR_3D-CAD-csPCa
Users that are interested in prostateMR_3D-CAD-csPCa are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Lesion and prostate masks for the PROSTATEx training dataset, after a lesion-by-lesion quality check.β93Jul 26, 2022Updated 4 years ago
- β13Sep 7, 2023Updated 3 years ago
- Grand Challenge wrapper for whole-gland prostate segmentation with nnUNetβ17Nov 28, 2023Updated 2 years ago
- PyTorch Implementation for: Deep Learning-Based Model For Prostate-MRI Segmentationβ14Jan 24, 2023Updated 3 years ago
- Model for the detection, segmentation, and classification of prostate lesions from mpMRI, using ProstateX data and Retina U-Netβ73Feb 27, 2022Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform β’ AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Code for MRI Prostate Segmentation and Contouringβ14Jan 8, 2021Updated 5 years ago
- Segmentation of prostatic zones (peripheral zone, central gland, AFS and distal prostatic urethra )β19Apr 12, 2021Updated 5 years ago
- β26Apr 20, 2023Updated 3 years ago
- Medical Deep Learning 2D high resolution image segmentation project: MICCAI 2019 Prostate Cancer segmentation challengeβ21Feb 23, 2021Updated 5 years ago
- sourcecode of multi-planar prostate segmentation (ISBI publication in 2018)β17Oct 8, 2019Updated 7 years ago
- An extension to 3D Slicer to support quantitative imaging and image-guided interventions research in prostate cancer.β23Aug 22, 2026Updated 2 months ago
- Preprocessing 3D medical images and image archives βgeared towards prostate cancer detection in MRI.β30Mar 26, 2025Updated last year
- Statistical functions based on bootstrapping for computing confidence intervals and p-values comparing machine learning models and human β¦β49Mar 8, 2022Updated 4 years ago
- Web/App based DICOM RT Viewerβ15Mar 27, 2026Updated 7 months ago
- Deploy on Railway without the complexity - Free Credits Offer β’ AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- SPIE-AAPM-NCI PROSTATEx Challenges-The PROSTATEx Challenge (" SPIE-AAPM-NCI Prostate MR Classification Challengeβ) focused on quantitatiβ¦β10Feb 18, 2021Updated 5 years ago
- β47Jun 13, 2024Updated 2 years ago
- Annotations for the PI-CAI Challenge: Public Training and Development Datasetβ81Jul 13, 2026Updated 3 months ago
- Segmentation of prostate from MRI scansβ45Jul 1, 2021Updated 5 years ago
- Evaluation of 3D detection and diagnosis performance βgeared towards prostate cancer detection in MRI.β28Jan 16, 2025Updated last year
- Baseline AI models for 3D csPCa detection/diagnosis in bpMRIβ64Feb 10, 2025Updated last year
- Harnessing Uncertainty in Domain Adaptation for MRI Prostate Lesion Segmentationβ17Jan 6, 2021Updated 5 years ago
- β24Mar 31, 2021Updated 5 years ago
- UC Davis 2021 Senior Design Project: This Web-based liver segmentation app provides all the standard features of a medical image viewer aβ¦β12Jun 2, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer β’ AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Using Segment Anything Model image encoder with convolutional decoder to clinically significant prostate cancer segmentationβ14Aug 7, 2024Updated 2 years ago
- β15Dec 6, 2020Updated 5 years ago
- Report Guided Annotationβ22Jan 21, 2025Updated last year
- TensorFlow implementation of our paper: "Automated detection of aggressive and indolent prostate cancer on magnetic resonance imaging [Meβ¦β12Aug 3, 2021Updated 5 years ago
- Use wgpu, a rust-python WebGPU implementation, in 3D Slicerβ10Jul 16, 2026Updated 3 months ago
- β27Aug 10, 2020Updated 6 years ago
- PyTorch demo of "DEMI: Discriminative Estimator of Mutual Information"β12Dec 1, 2020Updated 5 years ago
- β13Oct 20, 2016Updated 10 years ago
- Web App that lets you view raw pixel dataβ10Jul 16, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient β’ AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Deformable Registration for 3D image using Generative Adversarial Networks (GANs)β10Jun 9, 2021Updated 5 years ago
- SliceTracker is a 3D Slicer extension to support the workflow of MR-guided prostate biopsies.β12Oct 14, 2020Updated 6 years ago
- Prostate MR Image Segmentation 2012β138Nov 30, 2020Updated 5 years ago
- Convert numpy mask to dicom rtstructβ13Feb 28, 2023Updated 3 years ago
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.β56Jun 20, 2023Updated 3 years ago
- Simple DICOM validator based on DocBook DICOM specsβ38Updated this week
- DICOM WG-26 Annotation Hackathonβ26Oct 18, 2021Updated 5 years ago