DIAGNijmegen / prostateMR_3D-CAD-csPCaLinks
Hierarchical probabilistic 3D U-Net, with attention mechanisms (βππ΅π΅π¦π―π΅πͺπ°π― π-ππ¦π΅, ππππ¦π΄ππ¦π΅) and a nested decoder structure with deep supervision (βπππ¦π΅++). Built in TensorFlow 2.5. Configured for voxel-level clinically significant prostate cancer detection in multi-channel 3D bpMRI scans.
β43Updated 3 years ago
Alternatives and similar repositories for prostateMR_3D-CAD-csPCa
Users that are interested in prostateMR_3D-CAD-csPCa are comparing it to the libraries listed below
Sorting:
- Lesion and prostate masks for the PROSTATEx training dataset, after a lesion-by-lesion quality check.β87Updated 3 years ago
- β81Updated 2 years ago
- 3D-Unet: patched based Pytorch implementation for medical images segmentationβ63Updated 4 years ago
- Annotations for the PI-CAI Challenge: Public Training and Development Datasetβ64Updated 3 months ago
- β59Updated 3 years ago
- Model for the detection, segmentation, and classification of prostate lesions from mpMRI, using ProstateX data and Retina U-Netβ71Updated 3 years ago
- DICOM RT-Struct to maskβ102Updated last year
- Precision medicine toolboxβ70Updated last year
- Code to preprocess, segment, and fuse glioma MRI scans based on the BraTS Toolkit manuscript.β93Updated last month
- Automatic Segmentation of Vestibular Schwannoma with MONAI (PyTorch)β50Updated last year
- MRI Brain Tumor Segmentation - BraTS Challenge 2020β51Updated 4 years ago
- β153Updated this week
- A package to compute medical segmentation metrics.β175Updated last year
- Hand-crafted radiomics and deep learning-based radiomcis features extraction.β88Updated 3 years ago
- We provide DeepMedic and 3D UNet in pytorch for brain tumore segmentation. We also integrate location information with DeepMedic and 3D Uβ¦β112Updated 5 years ago
- [MICCAI2020]CPM-Net: A 3D Center-Points Matching Network for Pulmonary Nodule Detection in CT Scansβ59Updated 2 years ago
- new and more efficient version for 3D discrete deformable registration, reaching the highest accuracy in several benchmarksβ116Updated last month
- β42Updated 2 years ago
- Workflow for Optimal Radiomics Classificationβ79Updated 2 months ago
- Segmentation deep learning ALgorithm based on MONai toolbox: single and multi-label segmentation software developed by QIMP team-Vienna.β123Updated 3 years ago
- AdaMSS: Adaptive Multi-Modality Segmentation-to-Survival Learning for Survival Outcome Predictionβ15Updated 9 months ago
- β76Updated last month
- Automatic Liver Tumor Segmentation on Dynamic Contrast Enhanced MRI Using 4D Information: Deep Learning Model Based on 3D Convolution andβ¦β14Updated 3 years ago
- Docker for running stroke lesion core segmentationβ29Updated 4 years ago
- Airway segmentation from chest CTs using deep Convolutional Neural Networksβ71Updated last year
- This repository is an unoffical PyTorch implementation of Medical classification in 2D and 3D.β91Updated 4 years ago
- π₯ Command line tool for automatic liver parenchyma and liver vessel segmentation in CT using a pretrained deep learning modelβ70Updated last year
- β106Updated 2 weeks ago
- DeepMTS: Deep Multi-Task Survival model for joint survival prediction and tumor segmentationβ31Updated last year
- Deep Learning Registration of the Prostateβ56Updated last year