Hierarchical probabilistic 3D U-Net, with attention mechanisms (βππ΅π΅π¦π―π΅πͺπ°π― π-ππ¦π΅, ππππ¦π΄ππ¦π΅) and a nested decoder structure with deep supervision (βπππ¦π΅++). Built in TensorFlow 2.5. Configured for voxel-level clinically significant prostate cancer detection in multi-channel 3D bpMRI scans.
β43Feb 11, 2022Updated 4 years ago
Alternatives and similar repositories for prostateMR_3D-CAD-csPCa
Users that are interested in prostateMR_3D-CAD-csPCa are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Lesion and prostate masks for the PROSTATEx training dataset, after a lesion-by-lesion quality check.β92Jul 26, 2022Updated 3 years ago
- β12Sep 7, 2023Updated 2 years ago
- Grand Challenge wrapper for whole-gland prostate segmentation with nnUNetβ16Nov 28, 2023Updated 2 years ago
- Model for the detection, segmentation, and classification of prostate lesions from mpMRI, using ProstateX data and Retina U-Netβ73Feb 27, 2022Updated 4 years ago
- Code for MRI Prostate Segmentation and Contouringβ14Jan 8, 2021Updated 5 years ago
- AI Agents on DigitalOcean Gradient AI Platform β’ AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- β26Apr 20, 2023Updated 3 years ago
- Statistical functions based on bootstrapping for computing confidence intervals and p-values comparing machine learning models and human β¦β49Mar 8, 2022Updated 4 years ago
- β45Jun 13, 2024Updated 2 years ago
- Segmentation of prostatic zones (peripheral zone, central gland, AFS and distal prostatic urethra )β19Apr 12, 2021Updated 5 years ago
- Harnessing Uncertainty in Domain Adaptation for MRI Prostate Lesion Segmentationβ18Jan 6, 2021Updated 5 years ago
- Preprocessing 3D medical images and image archives βgeared towards prostate cancer detection in MRI.β28Mar 26, 2025Updated last year
- Using Segment Anything Model image encoder with convolutional decoder to clinically significant prostate cancer segmentationβ14Aug 7, 2024Updated last year
- β24Mar 31, 2021Updated 5 years ago
- Annotations for the PI-CAI Challenge: Public Training and Development Datasetβ78Jul 1, 2025Updated 11 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer β’ AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- UC Davis 2021 Senior Design Project: This Web-based liver segmentation app provides all the standard features of a medical image viewer aβ¦β12Jun 2, 2021Updated 5 years ago
- TensorFlow implementation of our paper: "Automated detection of aggressive and indolent prostate cancer on magnetic resonance imaging [Meβ¦β12Aug 3, 2021Updated 4 years ago
- β15Dec 6, 2020Updated 5 years ago
- An extension to 3D Slicer to support quantitative imaging and image-guided interventions research in prostate cancer.β23May 11, 2026Updated last month
- Report Guided Annotationβ22Jan 21, 2025Updated last year
- β27Aug 10, 2020Updated 5 years ago
- PyTorch demo of "DEMI: Discriminative Estimator of Mutual Information"β12Dec 1, 2020Updated 5 years ago
- PyTorch Implementation for: Deep Learning-Based Model For Prostate-MRI Segmentationβ14Jan 24, 2023Updated 3 years ago
- Baseline AI models for 3D csPCa detection/diagnosis in bpMRIβ65Feb 10, 2025Updated last year
- End-to-end encrypted email - Proton Mail β’ AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- SliceTracker is a 3D Slicer extension to support the workflow of MR-guided prostate biopsies.β13Oct 14, 2020Updated 5 years ago
- β13Oct 20, 2016Updated 9 years ago
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.β56Jun 20, 2023Updated 2 years ago
- Code for "HyperRecon: Computing Multiple Image Reconstructions with a Single Hypernetwork"β21Aug 1, 2022Updated 3 years ago
- β15Mar 7, 2024Updated 2 years ago
- Automatic Liver Tumor Segmentation on Dynamic Contrast Enhanced MRI Using 4D Information: Deep Learning Model Based on 3D Convolution andβ¦β14May 7, 2022Updated 4 years ago
- DICOM file converter in Pythonβ17Sep 3, 2025Updated 9 months ago
- Segmentation of prostate from MRI scansβ45Jul 1, 2021Updated 4 years ago
- Web/App based DICOM RT Viewerβ14Mar 27, 2026Updated 2 months ago
- Simple, predictable pricing with DigitalOcean hosting β’ AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Evaluation of 3D detection and diagnosis performance βgeared towards prostate cancer detection in MRI.β28Jan 16, 2025Updated last year
- Python Library to handle Input / Output conversion in Dicom <=> Convolutional Neural Networkβ17Aug 19, 2025Updated 9 months ago
- Prostate MR Image Segmentation 2012β138Nov 30, 2020Updated 5 years ago
- Open View Health is a free app anyone can use to visualize and securely share their medical data. A modern DICOM visualizer powered by Seβ¦β28Jul 17, 2023Updated 2 years ago
- Anatomy-guided Multimodal Registration by Learning Segmentation without Ground Truth: Application to Intraprocedural CBCT/MR Liver Segmenβ¦β29Jul 7, 2021Updated 4 years ago
- A differentiable bicubic interpolation module for TensorFlowβ24Feb 5, 2018Updated 8 years ago
- A pytorch implementation of CNN based MRI image registration based on Christodoulidis Stergios et al. "Linear and Deformable Image Registβ¦β58Aug 21, 2022Updated 3 years ago