DIAGNijmegen / prostateMR_3D-CAD-csPCa
Hierarchical probabilistic 3D U-Net, with attention mechanisms (βππ΅π΅π¦π―π΅πͺπ°π― π-ππ¦π΅, ππππ¦π΄ππ¦π΅) and a nested decoder structure with deep supervision (βπππ¦π΅++). Built in TensorFlow 2.5. Configured for voxel-level clinically significant prostate cancer detection in multi-channel 3D bpMRI scans.
β40Updated 3 years ago
Alternatives and similar repositories for prostateMR_3D-CAD-csPCa:
Users that are interested in prostateMR_3D-CAD-csPCa are comparing it to the libraries listed below
- 3D-Unet: patched based Pytorch implementation for medical images segmentationβ63Updated 3 years ago
- Annotations for the PI-CAI Challenge: Public Training and Development Datasetβ56Updated 5 months ago
- β76Updated last year
- Automatic Liver Tumor Segmentation on Dynamic Contrast Enhanced MRI Using 4D Information: Deep Learning Model Based on 3D Convolution andβ¦β12Updated 2 years ago
- Model for the detection, segmentation, and classification of prostate lesions from mpMRI, using ProstateX data and Retina U-Netβ64Updated 3 years ago
- Lesion and prostate masks for the PROSTATEx training dataset, after a lesion-by-lesion quality check.β80Updated 2 years ago
- β33Updated last year
- β57Updated 2 years ago
- fitushar / WeaklySupervised-3D-Classification-of-Chest-CT-using-Aggregated-MultiResolution-Segmentation-FeatureThis Repo contains the updated implementation of our paper "Weakly supervised 3D classification of chest CT using aggregated multi-resoluβ¦β24Updated 4 years ago
- The code for the paper Improving CT Image Tumor Segmentation Through Deep Supervision and Attentional Gates.β31Updated 3 years ago
- [MICCAI2020]CPM-Net: A 3D Center-Points Matching Network for Pulmonary Nodule Detection in CT Scansβ56Updated last year
- Preprocessing 3D medical images and image archives βgeared towards prostate cancer detection in MRI.β20Updated 2 months ago
- The official repository of the 2023 Kidney Tumor Segmentation Challenge (KiTS23)β94Updated 11 months ago
- Automatic end-to-end lung tumor segmentation from CT images.β28Updated last year
- Docker for running stroke lesion core segmentationβ29Updated 4 years ago
- DICOM RT-Struct to maskβ100Updated last year
- β41Updated 3 years ago
- Workflow for Optimal Radiomics Classificationβ73Updated last month
- 3D-UCaps: 3D Capsules Unet for Volumetric Image Segmentation (MICCAI 2021)β69Updated 3 months ago
- A python (Pytorch) implementation of Beam Dose Decomposition for Dose Prediction [MICCAI 2022]β19Updated last year
- Code for MRI Prostate Segmentation and Contouringβ14Updated 4 years ago
- Hand-crafted radiomics and deep learning-based radiomcis features extraction.β81Updated 2 years ago
- β22Updated 2 years ago
- β56Updated last year
- Visualization for radiomics feature generated by pyradiomicsβ48Updated 2 months ago
- β33Updated 2 years ago
- Pipeline for Lung Segmentation on the NSCLC Radiomics Dataset as part of the IEEE VIP 2018 Challengeβ16Updated 4 years ago
- Weakly supervised 3D classification of multi-disease chest CT scans using multi-resolution deep segmentation features via dual-stage CNN β¦β33Updated 4 years ago
- A module for 3D image augmentations for deep learning, specifically medical images such as CT, MRI.β27Updated 4 years ago
- Whole Heart Segmentationβ31Updated 4 years ago