TeamHeKA / medkit
This repository is now archived. Further development has been moved to https://github.com/medkit-lib/medkit.
☆23Updated last year
Alternatives and similar repositories for medkit:
Users that are interested in medkit are comparing it to the libraries listed below
- Modular, fast NLP framework, compatible with Pytorch and spaCy, offering tailored support for French clinical notes.☆121Updated last week
- Annotator building tool for Jupyter☆21Updated last month
- eds-scikit is a Python library providing tools to process and analyse OMOP data☆39Updated 3 months ago
- EDS-Pseudo is a hybrid model for detecting personally identifying entities in clinical reports☆52Updated this week
- Toolkit for a learning health system☆18Updated 2 months ago
- Natural language structuring library☆19Updated 9 months ago
- ✖️MEN - A Modular Toolkit for Cross-Lingual Medical Entity Normalization☆26Updated 3 months ago
- A Python library for performing NLP on clinical text written in Dutch☆35Updated 4 months ago
- Health Data Metrics (HDM) a Data Quality assessment Application.☆12Updated 2 years ago
- Clinical Natural Language Processing using spaCy, scispacy, and medspacy☆99Updated 11 months ago
- ☆13Updated 2 months ago
- Backend of the Cohort360 web app @ https://github.com/aphp/Cohort360-FrontEnd and the Administration Portal @ https://github.com/aphp/Coh…☆5Updated this week
- EDS-PDF is a generic, pure-Python framework for text extraction from PDF documents. It provides the machinery to use rule- or machine-lea…☆46Updated last month
- Phe2vec: Automated Disease Phenotyping based on Unsupervised Embeddings from Electronic Health Records☆24Updated 4 years ago
- A Serverless Text Annotation Tool for Corpus Development☆55Updated last month
- A fast dictionary-based approach for semantic annotation with approximate string matching algorithms☆15Updated last year
- Statistical model comparison with bootstrap and beyond☆29Updated 3 weeks ago
- PARROT is a collaborative initiative to create and annotate radiology reports to facilitate the access to high-quality multi-lingual medi…☆13Updated 5 months ago
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆64Updated 4 months ago
- GERNERMED++ is a transfer-learning-based open neural NER model for medical entities designed for German data.☆9Updated last year
- PyTorch extension for handling deeply nested sequences of variable length☆10Updated 3 months ago
- Python Radiology Text Analysis System☆13Updated last year
- Python package for machine learning for healthcare using a OMOP common data model☆107Updated last year
- This project looks at creating a controlled vocabulary for DICOM Pt 6 Data Dictionary with a focus on CS code strings.☆11Updated 2 months ago
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆76Updated this week
- A Python Natural Language Processing Toolkit for Medical Text Generation☆76Updated 5 months ago
- ☆64Updated 4 years ago
- E3C is a freely available multilingual corpus (Italian, English, French, Spanish, and Basque) of semantically annotated clinical narrativ…☆25Updated last year
- Fast, world class biomedical NER☆85Updated 3 weeks ago
- A deidentifier / deidentification pipeline developed by Stanford and Penn as part of the MIDRC organization.☆84Updated 9 months ago