Alternatives and similar repositories for nmdc-server:

Users that are interested in nmdc-server are comparing it to the libraries listed below

• girder / viime
  ☆8Updated last year
• microbiomedata / nmdc-metadata
  Managing metadata and policy around metadata in NMDC
  ☆2Updated 10 months ago
• LyonsLab / PhytoOracle
  Distributive pipelines for phenomic data analysis
  ☆13Updated 3 years ago
• EliLillyCo / pytest-wdl
  WDL plugin for pytest
  ☆48Updated last year
• MaayanLab / FAIRshake
  ☆10Updated 4 months ago
• BMCV / galaxy-image-analysis
  Galaxy tools for image analysis
  ☆16Updated 4 months ago
• jic-dtool / dtool
  Manage scientific data
  ☆16Updated 8 months ago
• bihealth / sodar-server
  SODAR: System for Omics Data Access and Retrieval
  ☆16Updated this week
• common-workflow-language / cwl-utils
  Python utilities for CWL
  ☆39Updated last week
• broadinstitute / gene-hints
  Discoverability for gene search
  ☆12Updated 2 years ago
• EBISPOT / DUO
  Ontology for consent codes and data use requirements
  ☆67Updated 2 years ago
• NIH-HPC / snakemake-class
  Class materials for the NIH HPC snakemake class
  ☆16Updated 5 months ago
• microbiomedata / nmdc-schema
  National Microbiome Data Collaborative (NMDC) unified data model
  ☆30Updated this week
• ISA-tools / isa-api
  ISA tools API
  ☆43Updated this week
• CNAG-Biomedical-Informatics / convert-pheno
  A software toolkit for the interconversion of standard data models for phenotypic data
  ☆12Updated last week
• collaborative-open-plant-omics / COPO
  Collaborative Open Plant Omics
  ☆17Updated 7 months ago
• datacarpentry / organization-genomics
  Project Organization and Management for Genomics
  ☆24Updated this week
• workflux / workflUX
  An open-source, cloud-ready web application for simplified deployment of big data workflows.
  ☆33Updated 7 months ago
• bgruening / docker-galaxy-imaging
  Galaxy Docker repository with Imaging tools (Galaxy Imaging flavour)
  ☆12Updated 5 years ago
• yakneens / butler
  Butler is a framework for running scientific workflows on public and academic clouds.
  ☆69Updated 5 years ago
• elixir-europe / BioHackathon-projects-2019
  This repository is meant for the participants of the BioHackathon hosted in Paris in Nov 2019 to share ideas, create issues, manage proje…
  ☆24Updated 3 years ago
• datacarpentry / cloud-genomics
  Introduction to Cloud Computing for Genomics
  ☆21Updated this week
• biothings / biothings.api
  BioThings API framework - Making high-performance API for biological annotation data
  ☆46Updated last week
• HumanCellAtlas / metadata-schema
  This repo is for the metadata schemas associated with the HCA
  ☆67Updated this week
• nextflow-io / cwl2nxf
  Import a CWL workflow specification to Nextflow script (experimental)
  ☆27Updated 6 years ago
• snakemake / snakemake-executor-plugin-slurm
  A Snakemake executor plugin for submitting jobs to a SLURM cluster
  ☆29Updated 2 weeks ago
• caporaso-lab / cual-id
  A package for creating and managing sample identifiers in comparative -omics datasets.
  ☆23Updated 8 years ago
• Planteome / plant-trait-ontology
  Explore the Plant Trait Ontology on the Planteome site.
  ☆41Updated last month
• EESI / themetagenomics
  ☆23Updated 4 years ago
• aCLImatise / CliHelpParser
  Reads the output from CLI help commands, and generates machine readable schemas (CWL etc)
  ☆14Updated 4 years ago