microbiomedata / nmdc-serverLinks
Data portal client and server for NMDC.
☆12Updated this week
Alternatives and similar repositories for nmdc-server
Users that are interested in nmdc-server are comparing it to the libraries listed below
Sorting:
- Distributive pipelines for phenomic data analysis☆13Updated 4 years ago
- Easily launch cloud applications.☆42Updated 11 months ago
- Butler is a framework for running scientific workflows on public and academic clouds.☆69Updated 5 years ago
- Manage scientific data☆16Updated last year
- A package for creating and managing sample identifiers in comparative -omics datasets.☆24Updated 8 years ago
- ☆10Updated 2 months ago
- BioThings API framework - Making high-performance API for biological annotation data☆48Updated last week
- A repository for the Playbook Workflow Builder project.☆22Updated last month
- X things you should take into consideration if you code for big data analysis☆23Updated 7 years ago
- Big Data Bag Utilities☆51Updated last month
- Galaxy Workflow Format 2☆10Updated last week
- ELIXIR Research Data Management Toolkit - Find the answers to your research data management questions here.☆104Updated last week
- transparently build CWL and Galaxy XML tool definitions for any script that uses argparse☆27Updated last year
- IPython2CWL is a tool for converting IPython Jupyter Notebooks to CWL Command Line Tools by simply providing typing annotation.☆17Updated 2 weeks ago
- Galaxy tools for image analysis☆19Updated this week
- This repo is for the metadata schemas associated with the HCA☆68Updated this week
- Generation of CWL programmatically. Available types: CommandLineTool and DockerRequirement☆29Updated 5 years ago
- The Refinery Platform is a data management, analysis and visualization system for bioinformatics and computational biology applications. …☆105Updated 2 years ago
- A Python library to work with high-throughput sequencing data in the context of data integration☆14Updated 8 years ago
- EDAM is an ontology of data analysis and data management in bio- and other sciences, and science-based applications. It comprises concept…☆132Updated last week
- Ontology for consent codes and data use requirements☆67Updated 3 years ago
- APIs for discovering genomics tools, their metadata and their containers☆32Updated 2 months ago
- Create cwl workflows by writing a simple Python script☆40Updated 5 years ago
- WDL plugin for pytest☆48Updated 2 years ago
- Framework for running text mining tools on latest publications. Main page at:☆14Updated 3 years ago
- Python utilities for CWL☆40Updated this week
- This repository is meant for the participants of the BioHackathon hosted in Paris in Nov 2019 to share ideas, create issues, manage proje…☆24Updated 4 years ago
- Dockerfiles to build Biopython instances☆28Updated 9 years ago
- Accumulating container resource usage with workflow metadata☆19Updated 4 years ago
- Mark2Cure allows anyone that can read English, regardless of background, to help in the process of biomedical discovery.☆14Updated 2 years ago