inoue0426 / awesome-computational-biologyView external linksLinks
Awesome list of computational biology.
☆113Jan 28, 2026Updated 2 weeks ago
Alternatives and similar repositories for awesome-computational-biology
Users that are interested in awesome-computational-biology are comparing it to the libraries listed below
Sorting:
- A list of web-based interactive biological data visualizations.☆221Apr 2, 2024Updated last year
- A curated list of awesome cytodata resources☆88Nov 15, 2023Updated 2 years ago
- A curated list of software, tools, pipelines, plugins etc. for image analysis related to biological questions.☆171Jan 27, 2026Updated 3 weeks ago
- A curated list of awesome Bioinformatics libraries and software.☆3,852Mar 21, 2025Updated 10 months ago
- Lint Nextflow pipelines in Python.☆11Jan 23, 2025Updated last year
- SciCount is tool focused on counting and classifying of objects in image-like data and scientific images, with training and example datas…☆11Oct 24, 2023Updated 2 years ago
- Scalable tumor phylogeny inference and validation from single-cell RNA or DNA data☆14Dec 24, 2023Updated 2 years ago
- pretrained LookingGlass language model for biological read-length DNA sequences, and related models derived from transfer learning☆15Sep 8, 2022Updated 3 years ago
- ☆10Sep 24, 2024Updated last year
- Curated (meta)list of resources for Biology.☆422Jan 15, 2024Updated 2 years ago
- ☆13Dec 23, 2025Updated last month
- ☆13Aug 12, 2023Updated 2 years ago
- ☆13Feb 12, 2023Updated 3 years ago
- NeST-VNN repo☆12Jun 13, 2025Updated 8 months ago
- Cookiecutter profile for making a NextFlow-based bioinformatics tool☆17Jul 8, 2024Updated last year
- ☆15Mar 25, 2016Updated 9 years ago
- [IJMS 2022] DRPreter: Interpretable Anticancer Drug Response Prediction Using Knowledge-Guided Graph Neural Networks and Transformer☆13Nov 30, 2022Updated 3 years ago
- ☆19Dec 10, 2024Updated last year
- ☆21Updated this week
- SEQprocess: a modularized and customizable pipeline framework for NGS processing in R package☆17Apr 17, 2020Updated 5 years ago
- Bayes-Adaptive Monte-Carlo Planning algorithm☆17Mar 5, 2013Updated 12 years ago
- Undergraduate course of Introduction of Computational Biology☆17Jan 26, 2026Updated 3 weeks ago
- Research Paper: "Graph Contrastive Learning as a Versatile Foundation for Advanced scRNA-seq Data Analysis"☆10Nov 20, 2024Updated last year
- Single-Cell Spatial Explorer☆15Dec 14, 2023Updated 2 years ago
- Fast and accurate protein function prediction from sequence through pretrained language model and homology-based label diffusion☆45Jul 27, 2024Updated last year
- Unsupervised neural network for learning embeddings of GO terms.☆20Feb 19, 2022Updated 3 years ago
- A Python toolkit for setting up benchmarking dataset using biomedical networks☆22Jan 19, 2026Updated 3 weeks ago
- Community-curated resources for research at the intersection of AI and molecular sciences☆17Aug 12, 2024Updated last year
- Python package for stochastic simulations☆18Feb 9, 2026Updated last week
- Imputing Single-cell RNA-seq data by combining Graph Convolution and Autoencoder Neural Networks☆20Jun 21, 2024Updated last year
- ☆22Mar 22, 2021Updated 4 years ago
- Genomics datastructures using Apache Arrow☆20Nov 19, 2020Updated 5 years ago
- ☆25May 16, 2023Updated 2 years ago
- Processing SIDER 4.1: the side effect resource☆23Feb 3, 2016Updated 10 years ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Jul 19, 2022Updated 3 years ago
- ☆29Oct 22, 2025Updated 3 months ago
- Official repository for discrete Walk-Jump Sampling (dWJS)☆55Dec 17, 2023Updated 2 years ago
- ☆24Mar 1, 2023Updated 2 years ago
- Dynamic modeling for business, economics, and ecology using the system dynamics approach☆30Apr 4, 2024Updated last year