A simple python SDK around PubMed API.
☆23Jan 1, 2025Updated last year
Alternatives and similar repositories for pubmedclient
Users that are interested in pubmedclient are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A MCP server for PubMed data☆122Sep 2, 2025Updated last year
- 🔍 A biomedical literature annotation and relationship mining server based on PubTator3, providing convenient access through the MCP inte…☆10Mar 31, 2025Updated last year
- [EMNLP 2023] FaMeSumm: Investigating and Improving Faithfulness of Medical Summarization. Support BART, PEGASUS, T5, mT5, BioBART, etc.☆13Jan 5, 2024Updated 2 years ago
- Code and data for NAACL 2018 article "Before Name-calling: Dynamics and Triggers of Ad Hominem Fallacies in Web Argumentation" by Haberna…☆13Jun 11, 2018Updated 8 years ago
- Command Line Interface (CLI) to export METS/ALTO documents to other formats.☆13Apr 25, 2022Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- MCP server for searching and querying PubMed medical papers/research database☆171Mar 19, 2026Updated 7 months ago
- Chromax is a breeding simulator based on JAX.☆10Jun 6, 2025Updated last year
- Tool to detect giant viruses aka giant endogenous viral elements (GEVEs) integrated into eukaryotic genomes.☆11Jun 10, 2026Updated 4 months ago
- Define your database schema in code and apply changes safely through pull requests or the CLI☆31Updated this week
- ☆21Oct 24, 2026Updated 2 weeks ago
- Natural language scientific literature search skills with semantic search over PubMed, arXiv, ChEMBL, DrugBank, bioRxiv, medRxiv, clinica…☆64Oct 4, 2026Updated last month
- Fast and accurate tool for calculating Average Nucleotide Identity (ANI) among virus and bacteria genomes☆13Sep 12, 2026Updated last month
- Core Hunter 3: a flexible core subset selection tool☆10Sep 11, 2025Updated last year
- Genome-wide association studies identify genetic variations associated with a target disease or trait. Researchers and clinicians can use…☆11Apr 12, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- The present study is finalised to determine the most advanced models in the literature capable of producing new high-quality molecules st…☆10Aug 31, 2021Updated 5 years ago
- BioContextAI Knowledgebase MCP server for biomedical agentic AI☆31Oct 12, 2026Updated 3 weeks ago
- ClockTimePicker is a SwiftUI view of a clock with draggable hour and minutes hands for selecting the time of a date.☆11Nov 5, 2021Updated 5 years ago
- EPI is a python package for inverse parameter inference☆13Jul 1, 2026Updated 4 months ago
- Adds tags to FHIR bundles and resources and uploads them to specified servers☆11Dec 9, 2022Updated 3 years ago
- Message Passing Neural Networks for Molecule Property Prediction☆12Jan 17, 2020Updated 6 years ago
- Python library & CLI to create, view and edit PFB files☆14Oct 29, 2026Updated last week
- Model Context Protocol server for accessing Reactome pathway and systems biology data.☆12Dec 21, 2025Updated 10 months ago
- SpotSweeper-py: Python version of SpotSweeper package☆11Sep 6, 2026Updated 2 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- capturing spatial colocalization and interaction in the TME using topological analysis in spatial transcriptomics data☆12May 14, 2025Updated last year
- FHIR data exploration with neo4j☆11Jan 15, 2022Updated 4 years ago
- External recommender example for the INCEpTION annotation platform using spacy☆23Mar 10, 2020Updated 6 years ago
- Medi_Query 🩺🔍 is a React Native app that helps users explore medicines, compare alternatives with prices, find nearby pharmacies, track…☆18Sep 24, 2026Updated last month
- This construct builds some elements for you to quickly launch an EMR Serverless application. After submitting the Emr Serverless job, you…☆11Nov 18, 2025Updated 11 months ago
- Analyze exome data for Mendelian disorders. Still in alpha-testing.☆10Apr 13, 2016Updated 10 years ago
- A jQuery / CSS progress bar that can display several steps☆11Oct 24, 2018Updated 8 years ago
- A package for doing flag algebra computations with the Sage mathematics system. Written in Python and Cython.☆13Mar 16, 2020Updated 6 years ago
- Python library for identification and masking of low-complexity regions in nucleotide sequences☆15Oct 14, 2026Updated 3 weeks ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Fast and exact ILP-based solvers for the Minimum Flow Decomposition problem, and variants of it.☆14Dec 4, 2025Updated 11 months ago
- The Genomics Tertiary Analysis and Machine Learning Using Amazon SageMaker solution creates a scalable environment in AWS to develop mach…☆11Jul 7, 2023Updated 3 years ago
- A jQuery plugin for customizing the caret (text cursor) on web pages☆11May 2, 2019Updated 7 years ago
- ☆11Mar 4, 2025Updated last year
- ☆15Feb 2, 2025Updated last year
- ☆11Jan 24, 2023Updated 3 years ago
- The Ontology for Nutritional Studies (ONS) has been developed as part of the ENPADASI European project (http://www.enpadasi.eu/) with the…☆14Feb 19, 2026Updated 8 months ago