Plotting graphs from XVGs generated by GROMACS in Python
☆32Dec 16, 2025Updated 2 months ago
Alternatives and similar repositories for GMXvg
Users that are interested in GMXvg are comparing it to the libraries listed below
Sorting:
- Gromacs_py is a python library allowing a simplified use of the gromacs MD simulation software. Gromacs_py can build topologie based on a…☆51Jul 5, 2022Updated 3 years ago
- Supernova's MM-PBSA binding free energy calculation tool.☆11Updated this week
- Repository of the gromacstutorials webpage☆14Jan 23, 2026Updated last month
- CHAPERONg: An automated pipeline for GROMACS MD simulations and trajectory analyses☆59Aug 2, 2025Updated 7 months ago
- A python script to prepare GROMACS input files using INTERFACE forcefield☆27Mar 22, 2022Updated 3 years ago
- Some GROMACS tutorials using methane and water☆15Dec 7, 2016Updated 9 years ago
- ☆22May 5, 2023Updated 2 years ago
- Convert files from the ATB repository to LAMMPS format☆22Aug 26, 2025Updated 6 months ago
- Computational Chemistry Workflows☆56Jul 19, 2022Updated 3 years ago
- Gromacs tutorial PPTs and mdp files, also some plotting scripts☆51Nov 9, 2025Updated 3 months ago
- OFFICIAL: AnteChamber PYthon Parser interfacE☆245Feb 18, 2026Updated 2 weeks ago
- hyb: a bioinformatics pipeline for the analysis of CLASH (crosslinking, ligation and sequencing of hybrids) data☆13Jul 12, 2024Updated last year
- Yasara plugins for Gromacs users☆33Jan 8, 2024Updated 2 years ago
- Density based object completion over PBC.☆30Dec 10, 2024Updated last year
- A python toolkit for analysing membrane protein-lipid interactions.☆70Oct 22, 2025Updated 4 months ago
- An Integrated VMD Graphical User Interface for Molecular Packing☆32Dec 28, 2024Updated last year
- Self explained tutorial for molecular dynamics simulation using gromacs☆44Nov 16, 2024Updated last year
- LiveCoMS GROMACS Tutorials Paper☆138Jun 28, 2019Updated 6 years ago
- Bayesian Logistic Regression with Hyper-LASSO priors☆10Dec 14, 2025Updated 2 months ago
- INSert membrANE - A simple, versatile tool for building coarse-grained simulation systems☆78Updated this week
- (Linux and macOS) AMDock: Assisted molecular docking with AutoDock4 and AutoDockVina☆75Aug 3, 2023Updated 2 years ago
- volume calculation and segmentation☆36May 20, 2024Updated last year
- ☆77Aug 3, 2023Updated 2 years ago
- Collected scripts for Pymol☆10Mar 18, 2015Updated 10 years ago
- GameDAO Protocol. Opinionated community governance, fundraising and engagement. For Polkadot parachains and evm based networks.☆12Oct 27, 2025Updated 4 months ago
- The future of Packmol☆40Feb 23, 2026Updated last week
- How to make images for publication using VMD☆43May 5, 2021Updated 4 years ago
- Some collected tools for molecular simulation pipelines☆43Aug 18, 2018Updated 7 years ago
- ☆11Jun 15, 2019Updated 6 years ago
- A potential solution to the early-stage small molecule hit identification☆14Jan 27, 2026Updated last month
- atomes: codeblocks dev files☆15Feb 27, 2026Updated last week
- This is for the AI enzyme design course☆13Nov 10, 2025Updated 3 months ago
- pymol implementation of WaterDock with Akshay Sridhar (@akshay-sridhar) and refactoring work by Patrick McCubbin (@mccubbinp)☆11Mar 25, 2024Updated last year
- ☆15Jun 29, 2015Updated 10 years ago
- 这里提供了一个yaml可以通过conda来快速无痛一键安装ESMfold,算是已经踩过所有通过官方安装遇到的暗坑了。☆18Jan 31, 2024Updated 2 years ago
- A fast, user-friendly package for self-organizing maps☆12May 15, 2025Updated 9 months ago
- Westlake BioBank for Chinese pilot project☆10May 17, 2023Updated 2 years ago
- A library for converting molecular topologies☆13May 20, 2015Updated 10 years ago
- Magic-for-Zotero 破解版 不会和http://magiczotero.top 通信安心使用 A cracked version of zotero magic☆22Apr 22, 2025Updated 10 months ago