PARMAGroup / UNet-Instance-Cell-SegmentationLinks
[Pytorch] This project aims to perform well at instance segmentation on the BBBC006 cells dataset. We tested UNet over several configurations including the loss function, evaluation function and the datasets.
☆44Updated 6 years ago
Alternatives and similar repositories for UNet-Instance-Cell-Segmentation
Users that are interested in UNet-Instance-Cell-Segmentation are comparing it to the libraries listed below
Sorting:
- [MICCAI 2019] Multi-scale Cell Instance Segmentation with Keypoint Graph based Bounding Boxes☆85Updated 5 years ago
- [Medical Image Analysis 2019] Attentive Neural Cell Instance Segmentation☆47Updated 3 years ago
- This repository contains my implementations of the algorithms which we used for evaluation of the MoNuSeg challenge at MICCAI 2018.☆44Updated 4 years ago
- Pytorch implementation of FullNet-varCE☆56Updated 4 years ago
- Instance segmentation via deep pixel embedding☆23Updated 5 years ago
- This repo is for Miccai monuseg challenge, by Jimmy from aetherAI☆17Updated 7 years ago
- This repository contains my implementations of the algorithms which MoNuSAC participants could use for data preparation to train their mo…☆64Updated 3 years ago
- An unsupervised (or self-supervised) loss function for binary image segmentation (TensorFlow)☆71Updated 3 years ago
- This repository includes the codes and descriptions to create a fully annotated dataset of nuclei from cryosectioned histological samples…☆42Updated 2 years ago
- Multi-Instance-Learning to check breast cancer. An implementation of Patch-based Convolutional Neural Network for Whole Slide Tissue Imag…☆51Updated 7 years ago
- Weakly Supervised Cell Instance Segmentation by Propagating from Detection Response, in MICCAI2019.☆43Updated 4 years ago
- The model of "Attention Based Glaucoma Detection: A Large-scale Database with a CNN Model" (CVPR2019)☆76Updated 9 months ago
- PAIP2019: Liver Cancer Segmentation☆33Updated 2 years ago
- Self-supervised nuclei segmentation (MICCAI 2020)☆44Updated 4 years ago
- Code for Paper: Multi Scale Curriculum CNN for Context-Aware Breast MRI Malignancy Classification☆46Updated 5 years ago
- Code for tutorial at MICCAI 2022☆93Updated last year
- Code release for the TIP paper and MICCAI2018 paper "One-Pass Multi-task Convolutional Neural Networks for Efficient Brain Tumor Segmenta…☆34Updated 5 years ago
- CNN based segmentation codes☆48Updated 2 years ago
- 3 Steps achieve SOTA in MICCAI 2020 Thyroid Nodule Segmentation Challenge☆62Updated 5 years ago
- A Comprehensive Analysis of Weakly-Supervised Semantic Segmentation in Different Image Domains (IJCV submission)☆48Updated 5 years ago
- Contains code for Semantic Segmentation of MoNuSeg 2018 challenge.☆41Updated 2 years ago
- This repository contains the code necessary in order to reproduce the work contained in the submitted paper: "Segmentation of Nuclei in H…☆53Updated 5 years ago
- ☆35Updated 6 years ago
- [TMI'2021][ISBI MoNuSAC'2020] 11th place solution to Multi-organ nuclei segmentation and classification challenge.☆31Updated 4 years ago
- An implementation of the W-Net: A Deep Model for Fully Unsupervised Image Segmentation☆57Updated 7 years ago
- cGAN-based Multi Organ Nuclei Segmentation☆192Updated 3 years ago
- Assessing Reliability and Challenges of Uncertainty Estimations for Medical Image Segmentation☆56Updated 2 years ago
- Weakly supervised nuclei segmentation using partial points annotation☆22Updated 4 years ago
- ☆14Updated 6 years ago
- Deep Convolutional Gaussian Mixture Model for Stain-Color Normalization in Histopathological H&E Images☆82Updated 4 years ago