PARMAGroup / UNet-Instance-Cell-SegmentationLinks
[Pytorch] This project aims to perform well at instance segmentation on the BBBC006 cells dataset. We tested UNet over several configurations including the loss function, evaluation function and the datasets.
☆44Updated 7 years ago
Alternatives and similar repositories for UNet-Instance-Cell-Segmentation
Users that are interested in UNet-Instance-Cell-Segmentation are comparing it to the libraries listed below
Sorting:
- [MICCAI 2019] Multi-scale Cell Instance Segmentation with Keypoint Graph based Bounding Boxes☆85Updated 6 years ago
- [Medical Image Analysis 2019] Attentive Neural Cell Instance Segmentation☆46Updated 4 years ago
- This repository contains my implementations of the algorithms which we used for evaluation of the MoNuSeg challenge at MICCAI 2018.☆44Updated 4 years ago
- Weakly Supervised Cell Instance Segmentation by Propagating from Detection Response, in MICCAI2019.☆43Updated 5 years ago
- Instance segmentation via deep pixel embedding☆23Updated 5 years ago
- This repository contains my implementations of the algorithms which MoNuSAC participants could use for data preparation to train their mo…☆67Updated 4 years ago
- Pytorch implementation of FullNet-varCE☆55Updated 4 years ago
- An unsupervised (or self-supervised) loss function for binary image segmentation (TensorFlow)☆71Updated 4 years ago
- The model of "Attention Based Glaucoma Detection: A Large-scale Database with a CNN Model" (CVPR2019)☆76Updated last year
- Assessing Reliability and Challenges of Uncertainty Estimations for Medical Image Segmentation☆56Updated 2 years ago
- A Comprehensive Analysis of Weakly-Supervised Semantic Segmentation in Different Image Domains (IJCV submission)☆48Updated 5 years ago
- MPM: Joint Representation of Motion and Position Map for Cell Tracking☆41Updated 4 years ago
- This repository contains the code necessary in order to reproduce the work contained in the submitted paper: "Segmentation of Nuclei in H…☆53Updated 6 years ago
- An implementation of the W-Net: A Deep Model for Fully Unsupervised Image Segmentation☆58Updated 7 years ago
- Code release for the TIP paper and MICCAI2018 paper "One-Pass Multi-task Convolutional Neural Networks for Efficient Brain Tumor Segmenta…☆34Updated 6 years ago
- Build U-Nets for segmentation from pre-trained TorchVision models.☆92Updated 6 years ago
- This repo is for Miccai monuseg challenge, by Jimmy from aetherAI☆17Updated 7 years ago
- Github pages☆64Updated 6 years ago
- 3 Steps achieve SOTA in MICCAI 2020 Thyroid Nodule Segmentation Challenge☆64Updated 5 years ago
- Code for our paper SAUNet: Shape Attentive U-Net for Interpretable Medical Image Segmentation. https://arxiv.org/pdf/2001.07645v3.pdf pub…☆99Updated 4 years ago
- Code for tutorial at MICCAI 2022☆94Updated 2 years ago
- ☆19Updated 6 years ago
- Code for Paper: Multi Scale Curriculum CNN for Context-Aware Breast MRI Malignancy Classification☆46Updated 6 years ago
- ☆37Updated 6 years ago
- Implementation of active contour loss function☆201Updated 5 years ago
- PAIP2019: Liver Cancer Segmentation☆35Updated 2 years ago
- Weakly Supervised Mitosis Detection in Breast Histopathology Images using Concentric Loss☆25Updated 6 years ago
- Volumetric MRI brain tumor segmentation using autoencoder regularization☆48Updated 2 years ago
- Usage of Multi-task deep learning network for semantic segmentation in medical images☆131Updated 5 years ago
- Multi-Instance-Learning to check breast cancer. An implementation of Patch-based Convolutional Neural Network for Whole Slide Tissue Imag…☆51Updated 8 years ago