Nicolik / Segm_Ident_Vertebrae_CNN_kmeans_knnLinks
Segmentation and Identification of Vertebrae in CT Scans using CNN, k-means Clustering and k-NN
☆64Updated 3 years ago
Alternatives and similar repositories for Segm_Ident_Vertebrae_CNN_kmeans_knn
Users that are interested in Segm_Ident_Vertebrae_CNN_kmeans_knn are comparing it to the libraries listed below
Sorting:
- Pytorch implementation of the paper Iterative fully convolutional neural networks for automatic vertebra segmentation accepted in MIDL201…☆64Updated last year
- 💥 Command line tool for automatic liver parenchyma and liver vessel segmentation in CT using a pretrained deep learning model☆68Updated 8 months ago
- SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI☆89Updated 6 months ago
- Segmentation deep learning ALgorithm based on MONai toolbox: single and multi-label segmentation software developed by QIMP team-Vienna.☆121Updated 3 years ago
- A Large-Scale Dataset for Spinal Vertebrae Segmentation in Computed Tomography☆176Updated last month
- DICOM RT-Struct to mask☆101Updated last year
- This is a 3D Slicer extension for segmentation and spatial reconstruction of infiltrated, collapsed, and emphysematous areas in lung CT.☆80Updated 8 months ago
- ☆50Updated last month
- End-to-end Python CT volume preprocessing pipeline to convert raw DICOMs into clean 3D numpy arrays for ML. From paper Draelos et al. "Ma…☆69Updated 4 years ago
- Everything about the 'Large Scale Vertebrae Segmentation Challenge' @ MICCAI 2019-2020☆231Updated 3 years ago
- 3D-Unet: patched based Pytorch implementation for medical images segmentation☆63Updated 3 years ago
- Code to preprocess, segment, and fuse glioma MRI scans based on the BraTS Toolkit manuscript.☆86Updated 9 months ago
- AeroPath: An airway segmentation benchmark dataset with challenging pathology☆37Updated last year
- Softmax for Arbitrary Label Trees (SALT) is a framework for training segmentation networks using conditional probabilities to model hiera…☆80Updated 8 months ago
- The official repository of "AbdomenCT-1K: Is Abdominal Organ Segmentation A Solved Problem?"☆248Updated last year
- A 3D medical Detection Transformer library. Papers accepted @ MIDL22 & MELBA23/02.☆63Updated 11 months ago
- A foundation model for universal 3D blood vessel segmentation. Paper accepted @ CVPR25.☆81Updated 3 weeks ago
- This Repo Will contain the Preprocessing Code for 3D Medical Imaging☆203Updated 4 years ago
- A package to compute medical segmentation metrics.☆165Updated 11 months ago
- Robust Brain Extraction Tool for CT Head Images☆46Updated 4 years ago
- Hippocampus Segmentation from MRI using 3D Convolutional Neural Networks in PyTorch☆41Updated 4 years ago
- NaviAirway: a Bronchiole-sensitive Deep Learning-based Airway Segmentation Pipeline☆54Updated 2 years ago
- Lesion and prostate masks for the PROSTATEx training dataset, after a lesion-by-lesion quality check.☆83Updated 2 years ago
- A 3D Slicer extension for efficient segmentation with nnInteractive.☆79Updated 2 weeks ago
- Official repository for autoPET I+II machine lerning challenge☆76Updated 10 months ago
- ☆29Updated last year
- Hierarchical probabilistic 3D U-Net, with attention mechanisms (—𝘈𝘵𝘵𝘦𝘯𝘵𝘪𝘰𝘯 𝘜-𝘕𝘦𝘵, 𝘚𝘌𝘙𝘦𝘴𝘕𝘦𝘵) and a nested decoder str…☆43Updated 3 years ago
- ☆149Updated 10 months ago
- 3D Slicer nnUNet integration to streamline usage for nnUNet based AI extensions.☆35Updated 5 months ago
- new and more efficient version for 3D discrete deformable registration, reaching the highest accuracy in several benchmarks☆108Updated last year