andreped / livermask
π₯ Command line tool for automatic liver parenchyma and liver vessel segmentation in CT using a pretrained deep learning model
β67Updated 7 months ago
Alternatives and similar repositories for livermask:
Users that are interested in livermask are comparing it to the libraries listed below
- Pytorch implementation of the paper Iterative fully convolutional neural networks for automatic vertebra segmentation accepted in MIDL201β¦β63Updated last year
- 3D-Unet: patched based Pytorch implementation for medical images segmentationβ63Updated 3 years ago
- Segmentation deep learning ALgorithm based on MONai toolbox: single and multi-label segmentation software developed by QIMP team-Vienna.β121Updated 3 years ago
- Implementation of the DeepVesselNet deep learning networkβ147Updated last year
- SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRIβ83Updated 4 months ago
- This is a 3D Slicer extension for segmentation and spatial reconstruction of infiltrated, collapsed, and emphysematous areas in lung CT.β77Updated 7 months ago
- Airway segmentation from chest CTs using deep Convolutional Neural Networksβ66Updated 10 months ago
- A Large-Scale Dataset for Spinal Vertebrae Segmentation in Computed Tomographyβ168Updated last month
- Brain vessel segmentation using 3D convolutional neural networksβ43Updated 2 years ago
- DICOM RT-Struct to maskβ101Updated last year
- End-to-end Python CT volume preprocessing pipeline to convert raw DICOMs into clean 3D numpy arrays for ML. From paper Draelos et al. "Maβ¦β65Updated 4 years ago
- Lung Segmentation UNet model on 3D CT scansβ51Updated 5 years ago
- β33Updated last year
- Robust Brain Extraction Tool for CT Head Imagesβ46Updated 4 years ago
- Automatic classification of tertiary bronchi based on bronchus masks using a rule-based approach.β40Updated 2 years ago
- Whole Heart Segmentationβ31Updated 4 years ago
- new and more efficient version for 3D discrete deformable registration, reaching the highest accuracy in several benchmarksβ105Updated last year
- There are some examples of 3D Medical Image Processβ41Updated 5 years ago
- Deep Learning Registration of the Prostateβ54Updated last year
- CNN for Classification of Coronary Artery Stenosis Score inMPR Images.β28Updated 5 years ago
- β181Updated 4 years ago
- We provide DeepMedic and 3D UNet in pytorch for brain tumore segmentation. We also integrate location information with DeepMedic and 3D Uβ¦β110Updated 4 years ago
- Maximum intensity projection for medical imageβ21Updated 7 years ago
- A 3D U-Net Based Solution to BraTS 2019 in Kerasβ50Updated 4 years ago
- A module for 3D image augmentations for deep learning, specifically medical images such as CT, MRI.β27Updated 4 years ago
- β110Updated 3 months ago
- Vox2Vox: 3D GAN for image segmentation using tensorflow-kerasβ50Updated 3 years ago
- Model Zoo for parameter settings in Elastix, ITKElastix and SimpleElastixβ51Updated last month
- Resources of the paper βDeep Learning to Segment Pelvic Bones: Large-scale CT Datasets and Baseline Modelsβ.β148Updated 3 years ago
- 3D airway segmentation methodβ60Updated 3 years ago