A tool for visualizing Martini force field simulations in VMD
☆25May 11, 2026Updated 2 months ago
Alternatives and similar repositories for MartiniGlass
Users that are interested in MartiniGlass are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Home of the public Martini 3 lipid parameters☆28Sep 29, 2025Updated 9 months ago
- Map atomistic trajectories to CG Martini level fast and compute interactions☆17Jun 1, 2026Updated last month
- Scripts for calculating RESP charges with Gaussian, starting only with .xyz file of your compound. Generate .mol2, .frcmod and .pdb with …☆10Mar 26, 2019Updated 7 years ago
- Package to perform minimum-distance distribution analyses of complex solute-solvent interactions☆25Jun 26, 2026Updated last month
- COBY (Coarse Grained System Builder) can be used to create coarse-grained systems in Martini 3☆49May 22, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A simple implementation of replica exchange MD simulations for OpenMM.☆26Jul 19, 2021Updated 5 years ago
- A Python library for constructing polymer topologies and coordinates☆22Sep 23, 2025Updated 10 months ago
- Perform polymerization and crosslinking in MARTINI coarse-grained forcefield using GROMACS MD package☆30Jan 21, 2026Updated 6 months ago
- TS2CG version 2☆27Apr 18, 2026Updated 3 months ago
- Mapping from Coarse Grain Models to Atomistic (and Back)☆21Sep 27, 2023Updated 2 years ago
- Describe and apply transformation on molecular structures and topologies☆148Jun 12, 2026Updated last month
- Differentiable Markov Chain Monte Carlo☆15Mar 23, 2024Updated 2 years ago
- A Program for Molecular Structure and Topology Generation of Polymer-Grafted Hybrid Nanostructures☆12Jun 17, 2026Updated last month
- Set of tools to generate a multi-eGO force field to perform molecular dynamics simulations☆16Updated this week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- COSMO: COarse-grained Simulation of intrinsically disordered prOteins with openMM☆15Jul 14, 2026Updated last week
- Builder for molecular systems☆17Feb 3, 2026Updated 5 months ago
- A fast solver for large scale MBAR/UWHAM equations☆40Sep 4, 2024Updated last year
- Pras Server is a library to repair PDB or mmCIF structures, add missing heavy atoms and hydrogen atoms and assign secondary structure by …☆28May 4, 2026Updated 2 months ago
- MD DaVis: A python package to analyze molecular dynamics trajectories of proteins☆17Updated this week
- ☆20Feb 6, 2017Updated 9 years ago
- Script to check required packages for Schrödinger suite on Linux machine☆12Jun 18, 2026Updated last month
- ☆27Jan 20, 2022Updated 4 years ago
- Python program for modelling and simulating polymers.☆44Jul 6, 2026Updated 2 weeks ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- INSert membrANE - A simple, versatile tool for building coarse-grained simulation systems☆91Apr 19, 2026Updated 3 months ago
- easyPARM is a computational tool developed to simplify the derivation of force field parameters for metal-containing molecular systems an…☆45May 21, 2026Updated 2 months ago
- ☆64Dec 10, 2025Updated 7 months ago
- A Python toolkit for the analyis of lipid membrane simulations☆36Jun 20, 2026Updated last month
- Repository of the gromacstutorials webpage☆14Jan 23, 2026Updated 6 months ago
- Self-supervised method for disentanglement, clustering and classification of objects in multidimensional image data☆17Aug 7, 2024Updated last year
- Software for automated processing of alchemical free energy calculations☆12Nov 7, 2022Updated 3 years ago
- Generate PEG topology for GROMACS and LAMMPS☆26Aug 19, 2024Updated last year
- Build coarse-grained mapping for molecules from a web-GUI☆19Sep 10, 2021Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Contact map analysis for biomolecules; based on MDTraj☆49May 9, 2026Updated 2 months ago
- Packs stuff in boxes☆24Jul 7, 2026Updated 2 weeks ago
- Gibbs sampling for expanded ensembles and replica exchange simulations☆11Jun 1, 2014Updated 12 years ago
- Python interface for Enhanced Monte Carlo (EMC)☆24Jul 13, 2026Updated last week
- Martini 3 Building Blocks for Lipid Nanoparticle Design☆27Mar 18, 2026Updated 4 months ago
- The integrated tempering sampling as a bias in PLUMED2☆11Jan 15, 2021Updated 5 years ago
- A tool to characterize the local structure of liquid water by geometric order parameters.☆15Jul 31, 2024Updated last year