Alternatives and similar repositories for Any2Graph

Users that are interested in Any2Graph are comparing it to the libraries listed below

• FanmengWang / PolyConf
  [ICML2025] The official implementation of "PolyConf: Unlocking Polymer Conformation Generation through Hierarchical Generative Models"
  ☆20Updated last month
• gracezhao1997 / EEGSDE
  This is the official implementation for Equivariant Enengy-guided SDE for Inverse Molecule Design (ICLR 2023)
  ☆47Updated last year
• AlgoMole / MolFM
  Implementation for NeurIPS 2023 paper "Equivariant Flow Matching with Hybrid Probability Transport for 3D Molecule Generation"
  ☆36Updated last year
• liugangcode / Graph-DiT
  The code for "Graph Diffusion Transformer for Multi-Conditional Molecular Generation"
  ☆75Updated last month
• FanmengWang / MPerformer
  [CIKM2023] The official implementation of "MPerformer: An SE(3) Transformer-based Molecular Perceptron"
  ☆20Updated 8 months ago
• MinkaiXu / AliDiff
  NeurIPS24: Aligning Target-Aware Molecule Diffusion Models with Exact Energy Optimization
  ☆38Updated 3 months ago
• FanmengWang / MMPolymer
  [CIKM2024] The official implementation of "MMPolymer: A Multimodal Multitask Pretraining Framework for Polymer Property Prediction"
  ☆25Updated last month
• aim-uofa / VFN
  [ICLR 2024 Spotlight] The official repo for the paper "De novo Protein Design using Geometric Vector Field Networks".
  ☆30Updated 10 months ago
• ChenyuWang-Monica / DRAKES
  Code for paper: "Fine-Tuning Discrete Diffusion Models via Reward Optimization with Applications to DNA and Protein Design"
  ☆56Updated 2 months ago
• xiaoxiaokuye / ICML_2024_ai4sci_paper
  ☆10Updated last year
• Rich-XGK / GTMGC
  Implementation of GTMGC: Using Graph Transformer to Predict Molecule’s Ground-State Conformation (ICLR2024 Spotlight).
  ☆17Updated last year
• SeulLee05 / MOOD
  Official code repository for the paper Exploring Chemical Space with Score-based Out-of-distribution Generation (ICML 2023)
  ☆38Updated last year
• mlvlab / LLaMo
  Official Implementation (Pytorch) of the "LLaMo: Large Language Model-based Molecular Graph Assistant", NeurIPS 2024
  ☆31Updated 5 months ago
• YangLing0818 / IRDiff
  [ICML 2024] Interaction-based Retrieval-augmented Diffusion Models for Protein-specific 3D Molecule Generation
  ☆30Updated 10 months ago
• andrew-cr / discrete_flow_models
  Code for the paper https://arxiv.org/abs/2402.04997
  ☆84Updated last year
• shenoynikhil / ETFlow
  Source code for Equivariant Flow Matching for Molecular Conformer Generation
  ☆38Updated 2 months ago
• Heisenburger2020 / Vabs-Net
  Vabs-Net: Pre-Training Protein Bi-level Representation Through Span Mask Strategy On 3D Protein Chains
  ☆16Updated 10 months ago
• A4Bio / ADesigner
  The official implementation of the AAAI'24 paper Cross-Gate MLP with Protein Complex Invariant Embedding is A One-Shot Antibody Designer.
  ☆11Updated last year
• jasonkyuyim / multiflow
  ☆186Updated last year
• GLAD-RUC / GGNN4Science
  ☆127Updated last month
• ykiiiiii / GraDe_IF
  Graph Denoising Diffusion for Inverse Protein Folding(NeurIPS 2023)
  ☆66Updated last year
• THUNLP-MT / MEAN
  This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.
  ☆96Updated 2 years ago
• bytedance / ConfDiff
  Official Implemetation of ConfDiff (ICML'24) - Protein Conformation Generation via Force-Guided SE(3) Diffusion Models
  ☆61Updated 10 months ago
• aim-uofa / BA-DDG
  [ICLR 2025 Spotlight] Boltzmann-Aligned Inverse Folding Model as a Predictor of Mutational Effects on Protein-Protein Interactions
  ☆36Updated 4 months ago
• aim-uofa / FADiff
  [ICML 2024] Floating Anchor Diffusion Model for Multi-motif Scaffolding
  ☆30Updated 10 months ago
• hehefan / Continuous-Discrete-Convolution
  ☆45Updated 2 years ago
• THUNLP-MT / PepGLAD
  Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)
  ☆85Updated 3 months ago
• linhaowei1 / TFG-Flow
  👌[ICLR 2025] TFG-Flow: Training-free Guidance in Multimodal Generative Flow
  ☆12Updated 4 months ago
• chao1224 / GeoSSL
  GeoSSL: Molecular Geometry Pretraining with SE(3)-Invariant Denoising Distance Matching, ICLR'23 (https://openreview.net/forum?id=CjTHVo1…
  ☆46Updated last year
• ujk21 / dyn-informed
  ☆12Updated last year