JasonJYang / GraphSynergyLinks
☆10Updated 4 years ago
Alternatives and similar repositories for GraphSynergy
Users that are interested in GraphSynergy are comparing it to the libraries listed below
Sorting:
- ☆32Updated 4 years ago
- Interpretable bilinear attention network with domain adaptation improves drug-target prediction.☆136Updated 2 years ago
- ☆15Updated 3 years ago
- TxGNN: Zero-shot prediction of therapeutic use with geometric deep learning and clinician centered design☆252Updated last year
- TransformerCPI: Improving compound–protein interaction prediction by sequence-based deep learning with self-attention mechanism and label…☆151Updated 3 years ago
- ☆94Updated 2 years ago
- ☆40Updated last year
- ☆46Updated last year
- ☆32Updated 4 years ago
- codes for KPGT (Knowledge-guided Pre-training of Graph Transformer)☆121Updated last year
- ☆27Updated 2 weeks ago
- PyTorch implementation of "TGSA: Protein-Protein Association-Based Twin Graph Neural Networks for Drug Response Prediction with Similarit…☆23Updated 4 years ago
- ☆58Updated last year
- Codes and models for the paper "Learning Unknown from Correlations: Graph Neural Network for Inter-novel-protein Interaction Prediction".☆83Updated 3 years ago
- ☆92Updated 2 years ago
- HyperAttentionDTI: improving drug–protein interaction prediction by sequence-based deep learning with attention mechanism. This repositor…☆44Updated 4 years ago
- GraphDTA: Predicting drug-target binding affinity with graph neural networks☆290Updated 4 years ago
- Sequence-to-drug concept adds a perspective on drug design. It can serve as an alternative method to SBDD, particularly for proteins that…☆77Updated 2 years ago
- ☆35Updated 11 months ago
- Source code for "DeepDTA: deep drug-target binding affinity prediction"☆288Updated 2 years ago
- ☆13Updated 2 years ago
- [RECOMB 2023] Official implementation of "Pisces: A combo-wise contrastive learning approach to synergistic drug combination prediction".☆14Updated 2 years ago
- ☆80Updated last year
- Accurate prediction of protein intrinsic disorder and its functions using graph-based interaction protein language model☆24Updated last year
- This is the repository for PIPR. This repository contains the source code and links to some datasets used in the ISMB/ECCB-2019 paper "Mu…☆107Updated 2 years ago
- [NBME] Interpretable identification of cancer genes across biological networks via transformer-powered graph representation learning☆23Updated 4 months ago
- ☆26Updated last year
- [BIB 2023] Official implementation of "R2-DDI: Relation-aware Feature Refinement for Drug-drug Interaction Prediction".☆13Updated last year
- S-PLM: Structure-aware Protein Language Model via Contrastive Learning between Sequence and Structure☆74Updated 2 weeks ago
- OriGene: A Self-Evolving Virtual Disease Biologist for Mechanism-Guided Therapeutic Target Discovery☆176Updated 4 months ago