☆11Jun 2, 2021Updated 5 years ago
Alternatives and similar repositories for GraphSynergy
Users that are interested in GraphSynergy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code for the MARSY model with sample input and response. I included figures to show the architecture and format of input samples.☆15Dec 22, 2022Updated 3 years ago
- [Nature Communications] A foundation model for drug synergy analysis☆16Nov 17, 2025Updated 11 months ago
- ☆20Dec 10, 2024Updated last year
- ☆31Jul 5, 2021Updated 5 years ago
- ☆10Oct 30, 2018Updated 8 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- EasyDockVina is a free tool to perform for receptor with multiple (batch) ligand docking with AutoDockVina.☆13Nov 22, 2024Updated last year
- ☆39Jan 21, 2025Updated last year
- Cyclic peptide binder design using a fragment docking and assembling strategy☆12May 20, 2025Updated last year
- smart charts☆20Sep 29, 2026Updated last month
- Leveraging Contrastive Learning for Enhanced Node Representations in Tokenized Graph Transformers☆10May 13, 2025Updated last year
- ☆16Jul 13, 2025Updated last year
- GNN enabled surrogate modeling for chemical docking☆16Nov 3, 2022Updated 3 years ago
- pytorch implementation of poincare embedding for ICD coding hierarchy(ICD-9-CM3)☆10Dec 25, 2020Updated 5 years ago
- 《动手学 Pi》：沿 15 个真实 checkpoint 从零构建 Pi-style Agent☆11Aug 24, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Machine learning model for predicting Human Oral Bioavailability☆13Dec 16, 2021Updated 4 years ago
- ☆11May 5, 2025Updated last year
- A tool for mapping protein-protein, protein-nucleic acid, and antigen-antibody interactions☆14May 14, 2025Updated last year
- ☆15Sep 18, 2026Updated last month
- TIP: Tri-graph Interaction Propagation model for Polypharmacy Side Effect Prediction (GRL@NeurIPS, 2019)☆25Dec 2, 2022Updated 3 years ago
- A fork for the old hhsuite-2.0.16☆13Nov 27, 2020Updated 5 years ago
- Reference implementation of the COBDock algorithm.☆10Jul 9, 2024Updated 2 years ago
- A simple custom QLoRA implementation for fine-tuning a language model (LLM) with basic tools such as PyTorch and Bitsandbytes, completely…☆15Jan 29, 2024Updated 2 years ago
- Code for our ACL'23 paper on how to identify metaphor mappings with the help of GPT-3☆12May 21, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- [RECOMB 2023] Official implementation of "Pisces: A combo-wise contrastive learning approach to synergistic drug combination prediction".☆14Nov 21, 2023Updated 2 years ago
- [AAAI24]Transformer-based relation-aware graph representation learning framework for DDI prediction☆16Jan 25, 2024Updated 2 years ago
- Deep Learning Can Identify Explainable Reasoning Paths of Mechanism of Drug Action for Drug Repurposing from Multilayer Biological Networ…☆12Aug 19, 2024Updated 2 years ago
- ☆14Apr 10, 2024Updated 2 years ago
- ☆11Jan 25, 2024Updated 2 years ago
- [Bioinformatics 2022] Cross-Modality and Self-Supervised Protein Embedding for Compound-Protein Affinity and Contact Prediction☆16Jun 6, 2024Updated 2 years ago
- Pytorch implementation of Pocket2Drug: a generative deep learning model to predict binding drugs for ligand-binding sites.☆22May 19, 2022Updated 4 years ago
- scripts for parsing PDB, fasta, and GO☆16Oct 20, 2021Updated 5 years ago
- ☆41Mar 22, 2018Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆11Oct 3, 2026Updated 3 weeks ago
- ☆19Sep 4, 2025Updated last year
- ☆13Dec 5, 2024Updated last year
- R package to analyze aberrant splicing junctions in tumor samples to identify neoepitopes☆16Sep 4, 2026Updated last month
- Source code and datasets for PresRecRF published on Phytomedicine.☆15May 18, 2025Updated last year
- Predicting Biomedical Interactions with Higher-Order Graph Convolutional Networks☆16Nov 9, 2021Updated 4 years ago
- ☆15Jan 16, 2024Updated 2 years ago