Alternatives and similar repositories for MathClub:

Users that are interested in MathClub are comparing it to the libraries listed below

• SjulsonLab / methods_class
  "Approaches to Study Neural Circuits" course
  ☆65Updated 2 months ago
• PeyracheLab / Tutorial_HDPlaceCells_Analysis
  A course given at the 2017 Canadian Neuroscience meeting, Neural Signal Analysis Satellite.
  ☆14Updated 6 years ago
• petersaj / neuropixels_trajectory_explorer
  Neuropixels trajectory explorer with the Allen CCF mouse atlas
  ☆73Updated 5 months ago
• joao-semedo / communication-subspace
  Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)
  ☆44Updated 5 years ago
• zashwood / glm-hmm
  Code to reproduce figures for "Mice alternate between discrete strategies during perceptual decision-making" from Ashwood, Roy, Stone, IB…
  ☆42Updated last year
• nsteinme / steinmetz-et-al-2019
  Code accompanying Steinmetz et al., 2019
  ☆57Updated 3 years ago
• cortex-lab / allenCCF
  Tools to work with Allen Inst CCF data in matlab
  ☆127Updated 11 months ago
• m-beau / NeuroPyxels
  NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…
  ☆114Updated 3 weeks ago
• pillowlab / neuroGLM
  Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).
  ☆68Updated 4 years ago
• ransona / ROIMatchPub
  Match suite2p ROIs between imaging sessions
  ☆24Updated 5 years ago
• AllenInstitute / brain_observatory_examples
  Gallery of visualizations and analyses of the Allen Brain Observatory
  ☆24Updated 2 years ago
• PeyracheLab / pynacollada
  pynapple collaborative data analysis (high level python scripts)
  ☆37Updated 10 months ago
• flatironinstitute / nemos
  NEural MOdelS, a statistical modeling framework for neuroscience.
  ☆89Updated this week
• MouseLand / pykilosort
  WIP: Python port of Kilosort2
  ☆50Updated last year
• int-brain-lab / ibllib
  IBL core shared libraries
  ☆62Updated this week
• AllenInstitute / openscope_databook
  OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁…
  ☆63Updated last month
• buzsakilab / buzcode
  Code for internal lab sharing - polishing has started but is by no means complete
  ☆125Updated last year
• EnnyvanBeest / UnitMatch
  Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days
  ☆51Updated 3 weeks ago
• nicholas-roy / psytrack
  ☆50Updated 4 years ago
• petersaj / AP_histology
  Histology processing
  ☆64Updated 11 months ago
• schnitzer-lab / EXTRACT-public
  EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…
  ☆70Updated 2 months ago
• NeurodataWithoutBorders / matnwb
  A Matlab interface for reading and writing NWB files
  ☆50Updated this week
• murthylab / GLMHMM
  ☆22Updated 5 years ago
• kushalkolar / MESmerize
  Platform for Calcium Imaging analysis. DEPRECATED.
  ☆60Updated last year
• rajanlab / CURBD
  Code to train and analyze multi-region data-constrained RNNs and perform Current-Based Decomposition (CURBD)
  ☆52Updated 4 years ago
• vandermeerlab / vandermeerlab
  vandermeerlab code base
  ☆16Updated last month
• arthur-pe / slicetca
  Library to perform Slice Tensor Component Analysis (sliceTCA)
  ☆45Updated 4 months ago
• jenniferColonell / ecephys_spike_sorting
  Modules for processing extracellular electrophysiology data from Neuropixels probes
  ☆57Updated last week
• HelmchenLabSoftware / Cascade
  Calibrated inference of spiking from calcium ΔF/F data using deep networks
  ☆129Updated last week
• GiocomoLab / ln-model-of-mec-neurons
  Code implements the LN model used to describe spike trains of MEC neurons based on the animal's position, head direction, speed, and thet…
  ☆23Updated 2 years ago