Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM)
☆83Apr 26, 2023Updated 3 years ago
Alternatives and similar repositories for scipion
Users that are interested in scipion are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Xmipp is a suite of image processing programs, primarily aimed at single-particle 3D electron microscopy.☆43Apr 21, 2026Updated last week
- A scientific image processing software suite with a focus on CryoEM and CryoET☆167Apr 20, 2026Updated last week
- Python programs for electron microscopy☆137Jan 15, 2026Updated 3 months ago
- PIP package of cryoCARE☆47Apr 2, 2024Updated 2 years ago
- ☆17Sep 20, 2022Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆49Apr 16, 2026Updated 2 weeks ago
- Pipeline for particle picking in cryo-electron microscopy images using convolutional neural networks trained from positive and unlabeled …☆208Mar 26, 2026Updated last month
- Parallel cryo electron tomography via beam image shift☆42Apr 4, 2026Updated 3 weeks ago
- automated on-the-fly tilt-series alignment☆11Jul 6, 2021Updated 4 years ago
- ☆41Sep 4, 2025Updated 7 months ago
- GPU-enhanced parallel implementation of single particle cryo-EM image processing☆12Oct 2, 2017Updated 8 years ago
- Image-processing software for cryo-electron microscopy☆531Apr 1, 2026Updated last month
- SerialEM mdoc files as pandas dataframes☆14Feb 4, 2026Updated 2 months ago
- These are programs that deal with anisotropy (both resolution and sampling)☆22Mar 16, 2018Updated 8 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- a bidirectional interface between Dynamo and the Warp-RELION-M pipeline☆20Jul 28, 2023Updated 2 years ago
- TomoNet is a GUI based pipeline package focusing on cryoET and STA data processing☆21Mar 12, 2026Updated last month
- The Swiss Army Knife for Editing Relion .STAR Files☆20Jul 1, 2024Updated last year
- scripts to monitor cryo-em jobs☆10Sep 29, 2021Updated 4 years ago
- Web application for monitor EM results☆13Updated this week
- STAR file I/O in Python☆56Nov 24, 2025Updated 5 months ago
- cryo_fit1 source codes, test files, live at .../phenix-xxxx/modules☆10Mar 25, 2022Updated 4 years ago
- ☆38Jun 22, 2023Updated 2 years ago
- Singularity image for cryo-CARE☆38Jan 7, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆24Apr 6, 2026Updated 3 weeks ago
- EMBuilder is a program based on template matching for model building of high resolution cryoEM maps.☆13Mar 6, 2017Updated 9 years ago
- Smart Parallel Automated Cryo Electron tomography☆24Updated this week
- ☆55Aug 19, 2024Updated last year
- SPIDER (System for Processing Image Data from Electron microscopy and Related fields) is an image processing system for electron microsc…☆20Apr 19, 2026Updated last week
- A Modular Platform for Streamlining Automated Cryo-FIB Workflows☆25Mar 5, 2025Updated last year
- 3D printing data in "Tidy up cryo-EM sample grids with 3D printed tools"☆14Apr 20, 2022Updated 4 years ago
- Ice gradient estimation for cryoEM☆11Oct 11, 2024Updated last year
- Automatic segmentation of electron microscopy volumes☆30Oct 23, 2012Updated 13 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- motion correction for movies recorded using direct electron detectors☆14Apr 30, 2017Updated 9 years ago
- Localized reconstruction of flexible subunits from cryo-EM images☆16Oct 19, 2020Updated 5 years ago
- ☆11May 31, 2022Updated 3 years ago
- De novo analysis for cryo-electron tomography☆25Nov 8, 2024Updated last year
- From cryo-EM density map to atomic structure☆28Mar 31, 2026Updated last month
- 3D-CTF correction for cryo-electron tomography☆29Nov 8, 2018Updated 7 years ago
- Two-Dimensional Template Matching implemented in Python☆16Updated this week