Relation extraction for protein to protein interactions to extraction strongly typed PPI relations.. My research topic.. So work in progress
☆16Nov 28, 2022Updated 3 years ago
Alternatives and similar repositories for PPI-typed-relation-extractor
Users that are interested in PPI-typed-relation-extractor are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- SageMaker recommendation engine demo☆11Jun 1, 2021Updated 4 years ago
- all-paths graph kernel for protein-protein interaction extraction☆12Apr 22, 2014Updated 11 years ago
- ☆19Mar 27, 2020Updated 6 years ago
- [ACL 2021 Findings] HySPA: Hybrid Span Generation for Scalable Text-to-Graph Extraction☆10Sep 16, 2021Updated 4 years ago
- Implementation of our paper "Injecting Knowledge Base Information into End-to-End Joint Entity and Relation Extraction and Coreference Re…☆10Jan 22, 2022Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- comparing drug classification methods☆21Feb 8, 2020Updated 6 years ago
- A deep learning method for sgRNA off-target propensity prediction.☆15Mar 17, 2020Updated 6 years ago
- Data-driven chemical-induced toxicity prediction by machine learning using chemical and bioactivity data☆10Feb 7, 2017Updated 9 years ago
- Data and codes for BioBERT-MRC☆11Oct 5, 2021Updated 4 years ago
- code for EMNLP 2022 paper Better Few-Shot Relation Extraction with Label Prompt Dropout☆26Nov 8, 2024Updated last year
- All development docs are kept in here.☆12Dec 1, 2024Updated last year
- This sample show you how to train BERT on Amazon Sagemaker using Spot instances☆31Dec 20, 2023Updated 2 years ago
- Source code and data files for "PEMT: A patent enrichment tool with applicability in drug discovery"☆16Jan 27, 2025Updated last year
- ☆24May 8, 2021Updated 4 years ago
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Text mining tool to retrieve protein-protein interactions from the scientific literature.☆13Jun 9, 2019Updated 6 years ago
- ☆12Oct 21, 2018Updated 7 years ago
- Network representation learning on drug-target-side effects-indication graphs for side effect prediction☆13Feb 4, 2020Updated 6 years ago
- 医学命名实体识别数据集制作☆17May 24, 2021Updated 4 years ago
- Effective Cascade Dual-Decoder Model for Joint Entity and Relation Extraction.☆18Jan 12, 2022Updated 4 years ago
- 图网络和少样本学习在自然语言理解领域的前沿综述。本文旨在探索自然语言理解领域中（主要探索了命名实体识别，关系抽取）一些深度学习前沿的应用（主要探索了结合图神经网络和少样本学习场景的方法）共计15篇顶会论文（EMNLP，AAAI，ACL，COLING）。☆18May 15, 2021Updated 4 years ago
- Named Entity Recognition (NER) of diseases☆13Feb 10, 2022Updated 4 years ago
- This repository contains part of the code used to make the images visible in the article "How does an AI Imagine the Universe?" published…☆12Oct 7, 2021Updated 4 years ago
- Babel creates cliques of equivalent identifiers across many biomedical vocabularies.☆14Apr 2, 2026Updated 2 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆20Feb 18, 2026Updated 2 months ago
- Improved Scaffold Hopping in Ligand-based Virtual Screening Using Neural Representation Learning☆21Mar 9, 2021Updated 5 years ago
- Relation Extraction with Semeval 2010 data, i2b2 2010 VA challenge classification data and DDI extraction data.☆19Jul 29, 2019Updated 6 years ago
- MD-ligand-receptor is a bioinformatics pipeline written in Python for analyzing non-covalent ligand-receptor interactions in 3D structure…☆11Jun 18, 2023Updated 2 years ago
- A LLM-based Agent Framework for Drug Discovery☆21Jan 11, 2026Updated 3 months ago
- An introduction to DSPy☆34Aug 30, 2025Updated 7 months ago
- ☆12Jan 24, 2020Updated 6 years ago
- [EMNLP 2022 Findings] Towards Realistic Low-resource Relation Extraction: A Benchmark with Empirical Baseline Study☆34Feb 23, 2024Updated 2 years ago
- Improving Distantly-Supervised Relation Extraction through BERT-based Label & Instance Embeddings☆24May 10, 2021Updated 4 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- PoS crypto coin over ipfs distributed storage network (with new consensus protocol 🙌)☆16Apr 10, 2024Updated 2 years ago
- Biological Information Extraction from Large Language Models (LLMs) (Journal of Computational Biology 2025)☆13Jun 18, 2025Updated 10 months ago
- ☆16May 22, 2025Updated 10 months ago
- Latent Constraints: Learning to Generate Conditionally from Unconditional Generative Models implemented by pytorch☆13Jun 11, 2018Updated 7 years ago
- Code repository for "Prioritizing Repurposable Drugs for SARS-CoV-2 using Deep Learning and Population-based Validation"☆16May 2, 2025Updated 11 months ago
- k8s worker that executes R code for experiments.☆12Apr 3, 2026Updated 2 weeks ago
- PlotNeuralNet is a Python package for generating high-quality neural network architecture diagrams using predefined or custom layer templ…☆31Dec 5, 2024Updated last year