Alternatives and similar repositories for brain_observatory_examples

Users that are interested in brain_observatory_examples are comparing it to the libraries listed below

• nsteinme / steinmetz-et-al-2019
  Code accompanying Steinmetz et al., 2019
  ☆60Updated 4 years ago
• SjulsonLab / methods_class
  "Approaches to Study Neural Circuits" course
  ☆65Updated 11 months ago
• MouseLand / rastermap
  a visualization method for neural data
  ☆238Updated 7 months ago
• joao-semedo / communication-subspace
  Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)
  ☆46Updated 6 years ago
• zashwood / glm-hmm
  Code to reproduce figures for "Mice alternate between discrete strategies during perceptual decision-making" from Ashwood, Roy, Stone, IB…
  ☆53Updated 2 years ago
• AllenInstitute / swdb_2022
  Repository to host materials for the summer workshop on the dynamic brain
  ☆30Updated 3 years ago
• murthylab / GLMHMM
  ☆24Updated 5 years ago
• arthur-pe / slicetca
  Library to perform Slice Tensor Component Analysis (sliceTCA)
  ☆55Updated 8 months ago
• rajanlab / CURBD
  Code to train and analyze multi-region data-constrained RNNs and perform Current-Based Decomposition (CURBD)
  ☆55Updated 4 years ago
• cortex-lab / allenCCF
  Tools to work with Allen Inst CCF data in matlab
  ☆142Updated 4 months ago
• zivlab / island
  Revealing neural correlates of behavior without behavioral measurements
  ☆15Updated 5 years ago
• nicholas-roy / psytrack
  ☆56Updated 8 months ago
• int-brain-lab / ibllib
  IBL core shared libraries
  ☆64Updated this week
• HelmchenLabSoftware / Cascade
  Calibrated inference of spiking from calcium ΔF/F data using deep networks
  ☆156Updated last month
• m-beau / NeuroPyxels
  NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…
  ☆137Updated 4 months ago
• pillowlab / GLMspiketraintutorial_python
  ☆60Updated 3 years ago
• nmtimme / Neuroscience-Information-Theory-Toolbox
  A MATLAB toolbox for performing information theory analyses of neuroscience data
  ☆76Updated 7 years ago
• AllenInstitute / openscope_databook
  OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁…
  ☆73Updated 4 months ago
• PeyracheLab / Tutorial_HDPlaceCells_Analysis
  A course given at the 2017 Canadian Neuroscience meeting, Neural Signal Analysis Satellite.
  ☆15Updated 7 years ago
• egokcen / DLAG
  A dimensionality reduction framework for disentangling the flow of signals between populations of neurons
  ☆32Updated 2 months ago
• zivlab / CellReg
  Registration of cells across sessions.
  ☆75Updated last year
• ahwillia / tensortools
  A very simple and barebones tensor decomposition library for CP decomposition a.k.a. PARAFAC a.k.a. TCA
  ☆39Updated 2 years ago
• pillowlab / neuroGLM
  Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).
  ☆71Updated 5 years ago
• NeurodataWithoutBorders / matnwb
  A Matlab interface for reading and writing NWB files
  ☆55Updated last week
• Eden-Kramer-Lab / replay_trajectory_classification
  State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data
  ☆51Updated last month
• zashwood / ssm
  Bayesian learning and inference for state space models
  ☆14Updated 3 years ago
• petersaj / neuropixels_trajectory_explorer
  Neuropixels trajectory explorer with the Allen CCF mouse atlas
  ☆78Updated 7 months ago
• petersaj / AP_histology
  Histology processing
  ☆71Updated 2 months ago
• Dynamics-of-Neural-Systems-Lab / MARBLE
  Package for the data-driven representation of non-linear dynamics over manifolds based on a statistical distribution of local phase portr…
  ☆88Updated 3 months ago
• PeyracheLab / pynacollada
  pynapple collaborative data analysis (high level python scripts)
  ☆37Updated last year