AllenInstitute / brain_observatory_examples
Gallery of visualizations and analyses of the Allen Brain Observatory
☆24Updated 2 years ago
Related projects ⓘ
Alternatives and complementary repositories for brain_observatory_examples
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆43Updated 5 years ago
- "Approaches to Study Neural Circuits" course☆63Updated 3 years ago
- Code to reproduce figures for "Mice alternate between discrete strategies during perceptual decision-making" from Ashwood, Roy, Stone, IB…☆42Updated last year
- Repository to host materials for the summer workshop on the dynamic brain☆26Updated 2 years ago
- Code accompanying Steinmetz et al., 2019☆55Updated 3 years ago
- ☆21Updated 4 years ago
- Revealing neural correlates of behavior without behavioral measurements☆13Updated 5 years ago
- Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).☆68Updated 4 years ago
- A very simple and barebones tensor decomposition library for CP decomposition a.k.a. PARAFAC a.k.a. TCA☆33Updated last year
- Library to perform Slice Tensor Component Analysis (sliceTCA)☆36Updated last month
- Code to train and analyze multi-region data-constrained RNNs and perform Current-Based Decomposition (CURBD)☆51Updated 3 years ago
- Bayesian learning and inference for state space models☆10Updated 2 years ago
- pynapple collaborative data analysis (high level python scripts)☆37Updated 7 months ago
- A course given at the 2017 Canadian Neuroscience meeting, Neural Signal Analysis Satellite.☆14Updated 6 years ago
- Neuroscience/electrophsyiology data analysis tools (mostly Matlab)☆14Updated 5 years ago
- IBL core shared libraries☆61Updated this week
- ☆47Updated 3 years ago
- A dimensionality reduction framework for disentangling the flow of signals between populations of neurons☆25Updated 2 years ago
- Simple tutorial on Gaussian and Poisson GLMs for single and multi-neuron spike train data☆91Updated 2 years ago
- ☆13Updated 6 months ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆45Updated this week
- Coding exercises for Neural Data Science at CSHL in 2019☆28Updated 4 years ago
- Code for analyzing multi-electrode array recordings (spikes & LFP) for Trujillo, Gao, Negraes et al., 2019.☆15Updated 4 years ago
- Neuroelectrophysiology object model and data analysis in Python.☆47Updated 3 weeks ago
- WIP: Python port of Kilosort2☆50Updated last year
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆51Updated this week
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆69Updated 2 months ago
- mathematical methods for neuroscience and machine learning☆23Updated 5 years ago
- NEW v1.1: https://github.com/dstolz/epsych_v1.1 Epsych is a toolbox for extending Tucker-Davis Technologies hardware and sof…☆15Updated 2 years ago
- Repository for course materials for the Summer Workshop on the Dynamic Brain 2019☆24Updated 5 years ago