AllenInstitute / brain_observatory_examplesLinks
Gallery of visualizations and analyses of the Allen Brain Observatory
☆25Updated 2 years ago
Alternatives and similar repositories for brain_observatory_examples
Users that are interested in brain_observatory_examples are comparing it to the libraries listed below
Sorting:
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆46Updated 5 years ago
- Code accompanying Steinmetz et al., 2019☆60Updated 3 years ago
- Library to perform Slice Tensor Component Analysis (sliceTCA)☆53Updated 3 months ago
- ☆23Updated 5 years ago
- Code to reproduce figures for "Mice alternate between discrete strategies during perceptual decision-making" from Ashwood, Roy, Stone, IB…☆48Updated last year
- Code to train and analyze multi-region data-constrained RNNs and perform Current-Based Decomposition (CURBD)☆53Updated 4 years ago
- "Approaches to Study Neural Circuits" course☆65Updated 6 months ago
- ☆54Updated 3 months ago
- Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).☆70Updated 5 years ago
- Bayesian learning and inference for state space models☆13Updated 3 years ago
- Repository to host materials for the summer workshop on the dynamic brain☆30Updated 2 years ago
- A dimensionality reduction framework for disentangling the flow of signals between populations of neurons☆31Updated last month
- A course given at the 2017 Canadian Neuroscience meeting, Neural Signal Analysis Satellite.☆14Updated 7 years ago
- Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).☆40Updated 5 years ago
- Neuroelectrophysiology object model and data analysis in Python.☆50Updated 3 months ago
- Automatic spike sorting, cluster visualization, spike sorting GUIs☆44Updated last year
- ☆18Updated last year
- A very simple and barebones tensor decomposition library for CP decomposition a.k.a. PARAFAC a.k.a. TCA☆35Updated last year
- Simple tutorial on Gaussian and Poisson GLMs for single and multi-neuron spike train data☆94Updated 2 years ago
- A repository of neural manifold techniques described and compared in "Neural manifold analysis of brain circuit dynamics in health and di…☆25Updated last year
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆61Updated this week
- Decoding and geometrical analysis of neural activity with built-in best practices☆44Updated 2 months ago
- pynapple collaborative data analysis (high level python scripts)☆37Updated last year
- Tools for analyzing spiking data from single-neuron recodings.☆27Updated 3 weeks ago
- A open toolbox of several machine learning approaches for sharp-wave ripple detection☆28Updated 11 months ago
- Sparse Component Analysis: An unsupervised method for recovering interpretable latent factors☆28Updated 4 months ago
- IBL core shared libraries☆63Updated last week
- This repo allows for the complete reproduction, from processed data, of all the main and supplemental figures in the manuscript Non-linea…☆23Updated last year
- MClust is a Matlab-based spike sorting toolbox for the separation of putative cells from multi-site neurophysiological recordings. It is…☆16Updated 2 years ago
- Code for analyzing multi-electrode array recordings (spikes & LFP) for Trujillo, Gao, Negraes et al., 2019.☆15Updated 5 years ago