3Scan / 3scan-skeleton
3D Image Skeletonization Tools
☆37Updated last year
Alternatives and similar repositories for 3scan-skeleton:
Users that are interested in 3scan-skeleton are comparing it to the libraries listed below
- Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)☆146Updated last month
- An interactive software to extract vessel centerline☆65Updated 3 years ago
- ☆31Updated 4 years ago
- Spatial Graph Extractor. Library and scripts to study graphs extracted from binary images, or to generate graphs and analyze them complet…☆5Updated 3 months ago
- Statistical shape model of the heart☆44Updated 8 years ago
- A software to edit, model and mesh vascular networks from centerlines.☆20Updated last year
- Volume Renderer with VTK☆79Updated 2 years ago
- Centerline Extraction, Skeletonization Methods, and Interbranch/Pore Segment Measurements.☆20Updated 10 years ago
- MATLAB code to calculate the 3D skeleton of a binary volume using parallel medial axis thinning☆46Updated 5 years ago
- Vessel and tube centerline extraction☆31Updated last month
- An ITK module to compute 3D thickness☆42Updated 3 weeks ago
- ☆13Updated 5 years ago
- A pipeline to extract vessels from MR images and perform analysis. Code to my TPAMI paper "Tracking the adaptation and compensation proce…☆29Updated 3 years ago
- Create volumetric mesh from segmentation using Cleaver2 or TetGen☆29Updated 9 months ago
- Cylindrical Shape Decomposition☆16Updated 2 years ago
- 2d and 3d distance transform based skeletonization☆22Updated last year
- An implementation of morphological contour interpolation☆33Updated last week
- Interactive registration tool for 3D medical datasets☆33Updated 10 months ago
- A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing vasculature (or blood vessels…☆44Updated last year
- Implementation of the DeepVesselNet deep learning network☆147Updated last year
- Python TEASAR Skeletonization for Sparse Labels☆9Updated last year
- This paper presents AVATREE, a computational modelling framework that generates Anatomically Valid Airway tree conformations and provides…☆15Updated 5 years ago
- Seg3D is a free volume segmentation and processing tool developed by the NIH Center for Integrative Biomedical Computing at the Universit…☆112Updated last year
- Segmentation of lungs in 3D Computed Tomography (CT) scans via non-rigid image registration☆24Updated 4 years ago
- ☆101Updated this week
- TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, …☆52Updated last month
- Dijkstra's Shortest Path for 6, 18, and 26-Connected 3D (Volumetric) Image Volumes☆79Updated 3 months ago
- 🔬🖥 Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumes☆47Updated 10 months ago
- Official SuperElastix repository☆87Updated 6 years ago
- Segmentation of Blood Vessels from 3D Medical Image☆26Updated 5 years ago