sedab / PathCNN
Pathology image classifier architecture
☆12Updated 5 years ago
Alternatives and similar repositories for PathCNN
Users that are interested in PathCNN are comparing it to the libraries listed below
Sorting:
- Class for getting ROIs and masks from annotated pyramidal images. A work in progress.☆12Updated 3 years ago
- Re-stained whole slide image alignment☆33Updated last year
- Image filters for digital pathology: detect pen marks, background, and artifacts. Use them for preprocessing towards deep learning☆28Updated 4 years ago
- Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis☆26Updated last year
- ☆16Updated 2 years ago
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆67Updated 2 years ago
- This repository contains the implementation of TILAb-score as described in the original paper.☆18Updated 5 years ago
- Data and code to accompany our Nature publication☆46Updated 3 years ago
- Code and GUI for Feature-driven Local Cell Graph (FLocK): New Computational Pathology based descriptors☆15Updated last year
- Implementation of LA_MIL, Local Attention Graph-based Transformer for WSIs, PyTorch☆25Updated last year
- ☆55Updated 3 years ago
- A biologically interpretable integrative deep learning model that integrates PAthological images and GEnomic data☆18Updated 4 years ago
- Artificial Intelligence predicts immune and inflammatory gene signatures directly from hepatocellular carcinoma histology images☆19Updated 10 months ago
- Multilevel cnn notebooks for Camelyon17☆19Updated 5 years ago
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆54Updated last year
- First commit☆61Updated 2 years ago
- predict microsatellite status from hematoxylin-eosin histology of gastrointestinal cancer☆104Updated 5 years ago
- Amgad M, Salgado R, Cooper LA. A panoptic segmentation approach for tumor-infiltrating lymphocyte assessment: development of the MuTILs m…☆17Updated last week
- Predicting gastric cancer outcome from resected lymph node histopathology images using deep learning☆37Updated 4 years ago
- Toolbox for measuring adversarial robustness to many transforms☆19Updated 2 weeks ago
- Synthetic histology using GANs, for deep learning model explainability and trainee education.☆15Updated last year
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆60Updated 3 months ago
- ☆21Updated 2 years ago
- Deep learning enabled assessment of cardiac allograft rejection from endomyocardial biopsies- Nature Medicine☆31Updated 2 years ago
- ECCV-AIMIA 2022 paper: "Multi-Scale Attention-based Multiple Instance Learning for Classification of Multi-Gigapixel Histology Images"☆12Updated 2 years ago
- Pipeline for computational pathology☆35Updated last year
- [The Lancet Digital Health, MICCAI2020 Oral] The official code of "Spatially-aware Graph Neural Networks and Cross-level Molecular Profil…☆26Updated last year
- Codes for Fast GPU-Enabled Color Normalization of Whole Slide Images in Digital Pathology☆75Updated 5 years ago
- ☆35Updated 2 years ago
- Histopathology Image Analysis☆92Updated last year