sedab / PathCNN
Pathology image classifier architecture
☆12Updated 4 years ago
Related projects ⓘ
Alternatives and complementary repositories for PathCNN
- Image filters for digital pathology: detect pen marks, background, and artifacts. Use them for preprocessing towards deep learning☆25Updated 4 years ago
- Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis☆18Updated 7 months ago
- Re-stained whole slide image alignment☆31Updated last year
- Data and code to accompany our Nature publication☆43Updated 2 years ago
- Class for getting ROIs and masks from annotated pyramidal images. A work in progress.☆12Updated 3 years ago
- This repository contains the implementation of TILAb-score as described in the original paper.☆17Updated 5 years ago
- Pipeline for computational pathology☆34Updated 10 months ago
- Histopathology Image Analysis☆91Updated last year
- predict microsatellite status from hematoxylin-eosin histology of gastrointestinal cancer☆100Updated 5 years ago
- A pan-cancer platform for mutation prediction from routine histology☆67Updated 3 years ago
- Artificial Intelligence predicts immune and inflammatory gene signatures directly from hepatocellular carcinoma histology images☆20Updated 4 months ago
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆67Updated 2 years ago
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆49Updated last week
- A Python package for handling histopathology whole-slide images using multiple instance learning (MIL) techniques.☆27Updated 6 months ago
- Full package for applying deep learning to virtual slides.☆67Updated 6 years ago
- Simple library for preprocessing histopathological whole-slide images (WSI) into tiles (a.k.a. patches) towards deep learning☆49Updated last year
- Pan-cancer computational histopathology reveals mutations, tumor composition and prognosis☆74Updated 3 years ago
- ☆15Updated 2 years ago
- ☆45Updated 2 years ago
- First commit☆58Updated 2 years ago
- Blazing fast nuclei segmentation for brightfield Whole Slide Images☆29Updated last month
- Toolbox for measuring adversarial robustness to many transforms☆19Updated 2 years ago
- ☆23Updated last week
- Code and GUI for Feature-driven Local Cell Graph (FLocK): New Computational Pathology based descriptors☆15Updated last year
- A biologically interpretable integrative deep learning model that integrates PAthological images and GEnomic data☆19Updated 4 years ago
- Tools to build deep learning pipelines.☆85Updated last week
- ☆40Updated 2 years ago
- Solid Tumor Associative Modeling in Pathology☆47Updated 2 months ago
- ☆49Updated 2 years ago
- Exploring prognostic indicators in pathological images of hepatocellular carcinoma based on deep learning☆41Updated 3 years ago