PPoPP24 AGAThA: Fast and Efficient GPU Acceleration of Guided Sequence Alignment for Long Read Mapping
☆22May 8, 2024Updated 2 years ago
Alternatives and similar repositories for AGAThA
Users that are interested in AGAThA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- [PACT'24] GraNNDis. A fast and unified distributed graph neural network (GNN) training framework for both full-batch (full-graph) and min…☆10Aug 13, 2024Updated last year
- A High-Throughput Multi-GPU System for Graph-Based Approximate Nearest Neighbor Search☆21Jul 22, 2025Updated 11 months ago
- Official repository of paper [FALQON: Accelerating LoRA Fine-tuning with Low-Bit Floating-Point Arithmetic, NeurIPS 2025]☆21Dec 2, 2025Updated 7 months ago
- [HPCA'24] Smart-Infinity: Fast Large Language Model Training using Near-Storage Processing on a Real System☆52Jul 21, 2025Updated last year
- ☆14Jan 12, 2022Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆21Jun 6, 2024Updated 2 years ago
- ☆53Jul 27, 2022Updated 3 years ago
- Qimera: Data-free Quantization with Synthetic Boundary Supporting Samples [NeurIPS 2021]☆34Dec 12, 2021Updated 4 years ago
- ☆28Nov 29, 2024Updated last year
- [DATE 2023] Pipe-BD: Pipelined Parallel Blockwise Distillation☆12Jul 13, 2023Updated 3 years ago
- ☆33Jan 22, 2025Updated last year
- Arya: Arbitrary Graph Pattern Mining with Decomposition-based Sampling☆18Sep 27, 2023Updated 2 years ago
- A graph linear algebra overlay☆52Apr 26, 2023Updated 3 years ago
- ☆14Jan 20, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Codebase for ICML'24 paper: Learning from Students: Applying t-Distributions to Explore Accurate and Efficient Formats for LLMs☆27Jun 25, 2024Updated 2 years ago
- [ASPLOS'26] HILOS: A Cost-Effective Near-Storage Processing Solution for Offline Inference of Long-Context LLMs☆20Jan 18, 2026Updated 6 months ago
- It's All In the Teacher: Zero-Shot Quantization Brought Closer to the Teacher [CVPR 2022 Oral]☆29Sep 15, 2022Updated 3 years ago
- ☆34Sep 9, 2020Updated 5 years ago
- ☆33Oct 28, 2020Updated 5 years ago
- ☆13Oct 6, 2024Updated last year
- GPU implementation of the Wavefront Alignment Algorithm for global, gap-affine, pairwise sequence alginment☆42Apr 30, 2025Updated last year
- GPU-Based Approximate Nearest Neighbor Search☆32May 15, 2026Updated 2 months ago
- Fast alignment tool based on bwa-mem☆26Feb 22, 2026Updated 4 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Python CFFI Binding around SuiteSparse:GraphBLAS☆24Apr 27, 2026Updated 2 months ago
- A container for all enzyme constrained models created by GECKO.☆17Jul 4, 2022Updated 4 years ago
- ETFL: A formulation for flux balance models accounting for expression, thermodynamics, and resource allocation constraints☆18Jul 8, 2025Updated last year
- ☆15Aug 16, 2025Updated 11 months ago
- ☆13Jun 14, 2026Updated last month
- Test of parallel compression acceleration☆16Sep 8, 2024Updated last year
- Artifact of Chimera☆18May 6, 2025Updated last year
- A COVID-19 CoV Genetics (CG) browser to inform therapeutics development☆26Jan 12, 2026Updated 6 months ago
- ☆11Oct 28, 2021Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Arioc: GPU-accelerated DNA short-read alignment☆70May 20, 2025Updated last year
- Official implementation for paper "Navigating Labels and Vectors: A Unified Approach to Filtered Approximate Nearest Neighbor Search"☆38Dec 21, 2024Updated last year
- Quantization in the Jagged Loss Landscape of Vision Transformers☆13Oct 22, 2023Updated 2 years ago
- Chorus: Heterogeneous GPU+CPU Multiple Protein Sequences Alignment Search for Large Database☆17Apr 7, 2025Updated last year
- CUDASW++4.0: Ultra-fast GPU-based Smith-Waterman Protein Sequence Database Search☆46Dec 10, 2025Updated 7 months ago
- Artifact evaluation of PLDI'24 paper "Allo: A Programming Model for Composable Accelerator Design"☆35Apr 11, 2024Updated 2 years ago
- FPGA简单入门☆12Nov 17, 2020Updated 5 years ago