PPoPP24 AGAThA: Fast and Efficient GPU Acceleration of Guided Sequence Alignment for Long Read Mapping
☆22May 8, 2024Updated last year
Alternatives and similar repositories for AGAThA
Users that are interested in AGAThA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- [PACT'24] GraNNDis. A fast and unified distributed graph neural network (GNN) training framework for both full-batch (full-graph) and min…☆10Aug 13, 2024Updated last year
- A High-Throughput Multi-GPU System for Graph-Based Approximate Nearest Neighbor Search☆21Jul 22, 2025Updated 8 months ago
- [HPCA'24] Smart-Infinity: Fast Large Language Model Training using Near-Storage Processing on a Real System☆53Jul 21, 2025Updated 8 months ago
- ☆14Jan 12, 2022Updated 4 years ago
- ☆52Jul 27, 2022Updated 3 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- ☆21Jun 6, 2024Updated last year
- ☆28Nov 29, 2024Updated last year
- ☆32Jan 22, 2025Updated last year
- GPU implementation of the Wavefront Alignment Algorithm for global, gap-affine, pairwise sequence alginment☆41Apr 30, 2025Updated 11 months ago
- Arya: Arbitrary Graph Pattern Mining with Decomposition-based Sampling☆16Sep 27, 2023Updated 2 years ago
- Source code for the paper: Accelerating Dynamic Graph Analytics on GPUs☆30Jun 19, 2023Updated 2 years ago
- A graph linear algebra overlay☆52Apr 26, 2023Updated 2 years ago
- Codebase for ICML'24 paper: Learning from Students: Applying t-Distributions to Explore Accurate and Efficient Formats for LLMs☆27Jun 25, 2024Updated last year
- ☆14Jan 20, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- It's All In the Teacher: Zero-Shot Quantization Brought Closer to the Teacher [CVPR 2022 Oral]☆29Sep 15, 2022Updated 3 years ago
- ☆33Sep 9, 2020Updated 5 years ago
- Official implementation for paper "Navigating Labels and Vectors: A Unified Approach to Filtered Approximate Nearest Neighbor Search"☆35Dec 21, 2024Updated last year
- ☆33Oct 28, 2020Updated 5 years ago
- ☆42Oct 11, 2025Updated 6 months ago
- ☆29Updated this week
- ☆28Mar 12, 2026Updated last month
- ☆13Jan 28, 2026Updated 2 months ago
- Global alignment and alignment extension☆142Jun 27, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Test of parallel compression acceleration☆16Sep 8, 2024Updated last year
- ☆11Oct 28, 2021Updated 4 years ago
- plane sweep filtering genome alignments☆23Mar 30, 2026Updated last week
- Quantization in the Jagged Loss Landscape of Vision Transformers☆13Oct 22, 2023Updated 2 years ago
- Chorus: Heterogeneous GPU+CPU Multiple Protein Sequences Alignment Search for Large Database☆17Apr 7, 2025Updated last year
- HeteroHalide: From Image Processing DSL to Efficient FPGA Acceleration☆15Sep 14, 2020Updated 5 years ago
- ☆14May 8, 2025Updated 11 months ago
- CUDASW++4.0: Ultra-fast GPU-based Smith-Waterman Protein Sequence Database Search☆46Dec 10, 2025Updated 4 months ago
- FPGA简单入门☆12Nov 17, 2020Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Intel Gaudi's Megatron DeepSpeed Large Language Models for training☆18Dec 19, 2024Updated last year
- PyTorch compilation tutorial covering TorchScript, torch.fx, and Slapo☆17Mar 13, 2023Updated 3 years ago
- A portable and efficient infrastracture for value profilers. Doc: https://vclinic.readthedocs.io/en/latest/index.html☆14Mar 4, 2026Updated last month
- Prompt format and padding guide for Llama 2☆12Sep 18, 2023Updated 2 years ago
- C++17 implementation of einops for libtorch - clear and reliable tensor manipulations with einstein-like notation☆11Oct 16, 2023Updated 2 years ago
- An Fast variant calling tool to detection germline and somatic variants☆12Feb 21, 2026Updated last month
- ☆14Apr 24, 2024Updated last year