TIO-IKIM / CLUE
CLUE: A Clinical Language Understanding Evaluation for LLMs
☆14Updated 4 months ago
Related projects ⓘ
Alternatives and complementary repositories for CLUE
- A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)☆140Updated this week
- Deep Generative Modelling of Patient Timelines using Electronic Health Records☆50Updated 10 months ago
- MedAlign is a clinician-generated dataset for instruction following with electronic medical records.☆89Updated last year
- ☆74Updated 2 months ago
- Expert-Curated Oncology Reports to Advance Language Model Inference☆25Updated 7 months ago
- A novel medical large language model family with 13/70B parameters, which have SOTA performances on various medical tasks☆119Updated 4 months ago
- For Med-Gemini, we relabeled the MedQA benchmark; this repo includes the annotations and analysis code.☆35Updated 5 months ago
- PMC-Patients☆83Updated 5 months ago
- ☆114Updated last year
- Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…☆39Updated 10 months ago
- public code repository for paper "Health system scale language models are general purpose clinical prediction engines"☆109Updated last year
- all scripts used in gatortron project☆111Updated last year
- General tutorials for the setup and use of MedCAT.☆31Updated last month
- Almanac: Retrieval-Augmented Language Models for Clinical Medicine☆27Updated 8 months ago
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆86Updated 5 months ago
- FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health record…☆110Updated 3 weeks ago
- Basic setup and easy to follow templates to interact and search CogStack for data analysts☆9Updated last month
- Clinical text summarization by adapting large language models☆120Updated 3 months ago
- Code repository for the framework to engage in clinical decision making task using the MIMIC-CDM dataset.☆22Updated last week
- This repository contains the code to replicate the data processing, modeling and reporting of our Holistic AI in Medicine (HAIM) Publicat…☆108Updated last year
- [NeurIPS 2024 D&B] Official code for "EHRNoteQA: An LLM Benchmark for Real-World Clinical Practice Using Discharge Summaries"☆21Updated this week
- Official Codes for "Publicly Shareable Clinical Large Language Model Built on Synthetic Clinical Notes"☆89Updated 3 months ago
- LongHealth: A Question Answering Benchmark with Long Clinical Documents☆17Updated 2 months ago
- CEHR-BERT: Incorporating temporal information from structured EHR data to improve prediction tasks☆31Updated last week
- Code for the paper "Automated Generation of Hospital Discharge Summaries Using Clinical Guidelines and Large Language Models"☆9Updated 6 months ago
- Clinical NLP Shared Task @ NAACL'24☆27Updated last month
- Code for the MedRAG toolkit☆196Updated last month
- PMC-Patients: A Large-scale Dataset of Patient Summaries and Relations for Benchmarking Retrieval-based Clinical Decision Support Systems…☆55Updated 11 months ago
- Code for BEHRT: Transformer for Electronic Health Records☆108Updated last year
- PLM-ICD: Automatic ICD Coding with Pretrained Language Models☆56Updated last year