Staining unmixing and normalization for histopathology images.
☆47Feb 8, 2019Updated 7 years ago
Alternatives and similar repositories for staining-normalization
Users that are interested in staining-normalization are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Stain normalization parameters used in the paper "F. Ciompi et al., The importance of stain normalization in colorectal tissue classifica…☆28May 15, 2019Updated 7 years ago
- Tools for tissue image stain normalisation and augmentation in Python 3☆348May 8, 2021Updated 5 years ago
- A Matlab implementation of Ruifrok's color deconvolution algorithm.☆20Apr 16, 2020Updated 6 years ago
- This is the MATLAB code for stain separation and color normalization in computational pathology (histopathological images)☆70Mar 12, 2016Updated 10 years ago
- This is the Challenge Project of ISBI 2016. Our result ranked in the 1st out of 20+ teams in the August 29 re-submission.☆44Aug 30, 2017Updated 9 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Codes for our MIA paper "DeepMitosis: Mitosis detection via deep detection, verification and segmentation networks".☆24Jun 4, 2019Updated 7 years ago
- adaptive color deconvolution for paper "Zheng et al., CMPB, 2019"☆34Dec 31, 2020Updated 5 years ago
- Feature Aware Normalization - Code for "Context-based Normalization of Histological Stains using Deep Convolutional Features"☆15Nov 11, 2018Updated 7 years ago
- Codes for Fast GPU-Enabled Color Normalization of Whole Slide Images in Digital Pathology☆75Mar 19, 2020Updated 6 years ago
- Implementation of Camelyon'16 grand challenge☆183Feb 25, 2019Updated 7 years ago
- PyTorch implementation for Camelyon17 (Breast Tumor Classification)☆85Mar 7, 2018Updated 8 years ago
- ☆72Feb 4, 2021Updated 5 years ago
- ☆23Jun 22, 2017Updated 9 years ago
- HistoQC is an open-source quality control tool for digital pathology slides☆331Sep 16, 2026Updated 3 weeks ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Corresponding code of 'Quiros, A. C., Coudray, N., Yeaton, A., Sunhem, W., Murray-Smith, R., Tsirigos, A., Yuan, K. Adversarial learning …☆16Jul 22, 2022Updated 4 years ago
- Program for the analysis and visualization of whole-slide images in digital pathology☆686Sep 12, 2023Updated 3 years ago
- A MATLAB library providing bindings to the C library OpenSlide (https://github.com/openslide/openslide) used for reading whole-slide imag…☆19Jan 19, 2019Updated 7 years ago
- Whole Slide Digital Pathology Image Tissue Localization☆45Oct 3, 2023Updated 3 years ago
- This is the source code for training and testing our three class CNN algorithm for generalized nuclei segmentation (IEEE TMI paper) using…☆54Jan 27, 2020Updated 6 years ago
- Some stain normalization code☆94Oct 9, 2022Updated 4 years ago
- Binary builds of OpenSlide and its dependencies☆24Oct 1, 2026Updated last week
- deep multi-instance learning for rna protein binding prediction☆10May 21, 2017Updated 9 years ago
- Robust quad-tree based registration on whole slide images☆20Apr 2, 2025Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- This repository contains the code necessary in order to reproduce the work contained in the submitted paper: "Segmentation of Nuclei in H…☆53Feb 7, 2020Updated 6 years ago
- ☆349Nov 21, 2021Updated 4 years ago
- Classification of colorectal cancer histology into 8 classes☆27Aug 27, 2019Updated 7 years ago
- Syntax - the arrangement of whole-slide-images and their image tiles to create well-formed computational pathology pipelines.☆55Nov 22, 2022Updated 3 years ago
- DiffInfinite Official Code☆36Oct 30, 2024Updated last year
- ☆12Mar 8, 2018Updated 8 years ago
- ☆15Aug 8, 2017Updated 9 years ago
- a boosting-based Multiple Instance Learning (MIL) package that includes MIL-Boost and MCIL-Boost☆31Aug 5, 2020Updated 6 years ago
- ☆10Jan 9, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Python Whole Slide Image Preprocessing☆303Nov 15, 2022Updated 3 years ago
- [IJHCS] UTA7: a dataset with DICOM files of medical imaging provided by radiologists. The work was published in the International Journal…☆10Jun 1, 2022Updated 4 years ago
- Physics-informed neural networks for myocardial perfusion MRI quantification.☆14Nov 26, 2020Updated 5 years ago
- MICCAI18 DeepEM: Deep 3D ConvNets with EM for Weakly Supervised Pulmonary Nodule Detection☆16Jul 22, 2018Updated 8 years ago
- List of academic institutes/companies working on computer-based digital pathology image analysis☆46Jul 17, 2026Updated 2 months ago
- ☆25Apr 8, 2022Updated 4 years ago
- This study proposes a novel PG-MLIF framework, that employs deep learning, for integrating pathological images and genomic data. The code…☆11Jun 28, 2024Updated 2 years ago