This is the source code for training and testing our three class CNN algorithm for generalized nuclei segmentation (IEEE TMI paper) using Torch.
☆54Jan 27, 2020Updated 6 years ago
Alternatives and similar repositories for Nuclei_Segmentation
Users that are interested in Nuclei_Segmentation are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This repository contains the code necessary in order to reproduce the work contained in the submitted paper: "Segmentation of Nuclei in H…☆53Feb 7, 2020Updated 6 years ago
- Weakly Supervised Mitosis Detection in Breast Histopathology Images using Concentric Loss☆25Nov 14, 2019Updated 6 years ago
- 2018 Data Science Bowl 2nd Place Solution☆103Jul 15, 2018Updated 8 years ago
- Stain normalization parameters used in the paper "F. Ciompi et al., The importance of stain normalization in colorectal tissue classifica…☆28May 15, 2019Updated 7 years ago
- Pytorch implementation of FullNet-varCE☆54Feb 17, 2021Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- End-to-end one-class instance segmentation based on U-Net architecture for Data Science Bowl 2018 in Kaggle☆58Apr 17, 2018Updated 8 years ago
- This is the MATLAB code for stain separation and color normalization in computational pathology (histopathological images)☆70Mar 12, 2016Updated 10 years ago
- Our solution for ICIAR 2018 Grand Challenge☆193Dec 16, 2020Updated 5 years ago
- cGAN-based Multi Organ Nuclei Segmentation☆198Jun 10, 2022Updated 4 years ago
- This repository contains my implementations of the algorithms which we used for evaluation of the MoNuSeg challenge at MICCAI 2018.☆44Jul 22, 2021Updated 5 years ago
- CNN based segmentation codes☆48Jan 19, 2023Updated 3 years ago
- This repo is for Miccai monuseg challenge, by Jimmy from aetherAI☆17Oct 2, 2018Updated 7 years ago
- Code related to my Bachelor's Thesis Project☆13Jun 17, 2016Updated 10 years ago
- This Repository is project directory of the Distance Regression and Classification Network (DRCA-Net).DRCA-net is convolutional neural ne…☆13Jan 29, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Simultaneous Nuclear Instance Segmentation and Classification in H&E Histology Images.☆732Oct 27, 2023Updated 2 years ago
- Demos for Cell Proposal Networks presented in ICIP 16 and DLMIA 16 (MICCAI-W)☆17May 9, 2017Updated 9 years ago
- This repository contains the codes to run the nuclei segmentation pipeline of the BIOMAG group inspired by Kaggle's Data Science Bowl 201…☆55Sep 14, 2020Updated 5 years ago
- ☆77Dec 16, 2024Updated last year
- Staining unmixing and normalization for histopathology images.☆47Feb 8, 2019Updated 7 years ago
- Deep Convolutional Gaussian Mixture Model for Stain-Color Normalization in Histopathological H&E Images☆83Aug 26, 2021Updated 4 years ago
- [Medical Image Analysis 2019] Attentive Neural Cell Instance Segmentation☆45Feb 6, 2022Updated 4 years ago
- ICCV2021-CDNet: Centripetal Direction Network for Nuclear Instance Segmentation☆30Dec 12, 2021Updated 4 years ago
- Segmenting WSIs using Deep Convolutional Neural Networks☆19Aug 9, 2018Updated 7 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- MICCAI18 DeepEM: Deep 3D ConvNets with EM for Weakly Supervised Pulmonary Nodule Detection☆18Jan 16, 2019Updated 7 years ago
- This repository contains adaptations of the state-of-the-art deep learning based object detection models for the detection of cell nuclei…☆26Dec 8, 2022Updated 3 years ago
- Detect location and draw boundary of nuclei from microscopic images☆80Dec 6, 2020Updated 5 years ago
- This is the Challenge Project of ISBI 2016. Our result ranked in the 1st out of 20+ teams in the August 29 re-submission.☆44Aug 30, 2017Updated 8 years ago
- nucleus/cell and histopathology image classification,detection,segmentation☆264Dec 15, 2020Updated 5 years ago
- kaggle-DATA-SCIENCE-BOWL-2018(U-net)☆15May 2, 2018Updated 8 years ago
- Pytorch Implement of Boundary-assisted Region Proposal Networks for Nucleus Segmentation☆18Jun 8, 2021Updated 5 years ago
- [MICCAI 2021] BiX-NAS: Searching Efficient Bi-directional Architecture for Medical Image Segmentation☆38Sep 12, 2022Updated 3 years ago
- deep multi-instance learning for rna protein binding prediction☆10May 21, 2017Updated 9 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Stage1 test images and masks for DSB 2018☆15Apr 12, 2018Updated 8 years ago
- ☆62Jul 20, 2018Updated 8 years ago
- This repository includes the codes and descriptions to create a fully annotated dataset of nuclei from cryosectioned histological samples…☆45Feb 8, 2023Updated 3 years ago
- Feature Aware Normalization - Code for "Context-based Normalization of Histological Stains using Deep Convolutional Features"☆15Nov 11, 2018Updated 7 years ago
- Code for NeurIPS 2020 article "Contrastive learning of global and local features for medical image segmentation with limited annotations"☆185Jul 12, 2021Updated 5 years ago
- Mask R-CNN for object detection and instance segmentation on Keras and TensorFlow☆31Feb 21, 2018Updated 8 years ago
- Detect whether a mitosis exists in an image of breast cancer tumor cells☆25Sep 17, 2025Updated 10 months ago