shirgur / UMIS
Official PyTorch implementation of "Unsupervised Microvascular Image Segmentation Using an Active Contours Mimicking Neural Network"
☆73Updated 4 years ago
Alternatives and similar repositories for UMIS:
Users that are interested in UMIS are comparing it to the libraries listed below
- pyTorch implementation of clDice☆29Updated 5 years ago
- An unofficial pytorch implementation for "Learning Active Contour Models for Medical Image Segmentation" by Chen, Xu, et al.☆75Updated 3 months ago
- SynSeg-Net: Synthetic Segmentation Without Target Modality Ground Truth☆68Updated 6 years ago
- VNet for 3d volume segmentation☆44Updated 4 years ago
- Probabilistic Dense Displacement Network (3D discrete deep learning registration)☆63Updated 3 years ago
- ☆28Updated 5 years ago
- Reference implementation of Chan-Vese Level Set segmentation for 2D grayscale images☆38Updated 7 years ago
- Image-and-Spatial Transformer Networks☆109Updated 2 years ago
- A loss function (Weighted Hausdorff Distance) for object localization in PyTorch☆90Updated 6 years ago
- Code for MICCAI2020 paper "An Elastic Interaction-Based Loss Function for Medical Image Segmentation"☆38Updated last year
- Code for our arxiv preprint: https://arxiv.org/abs/1904.05236☆34Updated 6 years ago
- Non-local U-Nets for Biomedical Image Segmentation☆105Updated 4 years ago
- Elastic Boundary Projection for 3D Medical Image Segmentation - CVPR 2019☆65Updated 5 years ago
- Efficient Segmentation for Volumetric Data☆44Updated 6 years ago
- ☆95Updated 5 years ago
- matlab and python wrap of crf and dense crf, both 2d and 3d are supported☆169Updated 2 years ago
- Uncertainty-Guided Interactive Refinement for Segmentation☆58Updated 3 years ago
- Pytorch implementation of the LearnedRandomWalker module☆29Updated 4 years ago
- ☆16Updated 6 years ago
- Official PyTorch implementation of "End to End Trainable Active Contours via Differentiable Rendering"☆93Updated 5 years ago
- Code for the MICCAI 2018 paper "Deep Attentional Features for Prostate Segmentation in Ultrasound"☆63Updated 6 years ago
- implementation of 3DUNet by PyTorch 1.0☆63Updated 4 years ago
- A tensorflow implementation of "Non-rigid image registration using fully convolutional networks with deep self-supervision"☆49Updated 6 years ago
- Top-ranked solution and its improvement for MICCAI 2018 ROBOT, BRATS and REFUGE segmentation challenge☆21Updated 5 years ago
- ☆36Updated 2 years ago
- Code for tutorial at MICCAI 2022☆93Updated last year
- Deep Attentive Features for Prostate Segmentation in 3D Transrectal Ultrasound☆74Updated 4 years ago
- [MICCAI 2019] Multi-scale Cell Instance Segmentation with Keypoint Graph based Bounding Boxes☆84Updated 5 years ago
- A Deep Learning method to segment punctate white matter lesions (PWMLs); Brain tumor segmentation;☆32Updated 5 years ago
- Constrained Domain Adaptation for Segmentation☆29Updated 2 years ago