Optimized implementation of suffix tree in python using Ukkonen's algorithm.
☆53Oct 30, 2025Updated 4 months ago
Alternatives and similar repositories for SuffixTree
Users that are interested in SuffixTree are comparing it to the libraries listed below
Sorting:
- A flexible implementation of enhanced suffix arrays in template based C++. Supports single and multi-position wildcard. Fast queries than…☆21Oct 1, 2020Updated 5 years ago
- Source code for Biolisp community website☆15Apr 4, 2018Updated 7 years ago
- Cross-platform GUI desktop application for making biological heatmaps☆19Nov 10, 2022Updated 3 years ago
- lazy JSON I/O in Python☆21Jul 29, 2022Updated 3 years ago
- ChIP-seq/RNA-seq analysis software suite for gene expression heatmaps☆23Oct 12, 2017Updated 8 years ago
- Super high performance interactive heatmap software☆32Nov 19, 2018Updated 7 years ago
- ☆12Mar 10, 2024Updated last year
- ☆11Feb 28, 2026Updated last week
- R as a backend for web apps.☆10Mar 7, 2018Updated 7 years ago
- A research notes about how to get benefits from Cython to be asynchronous beyond IO tasks☆11Feb 17, 2020Updated 6 years ago
- A user-friendly, opinionated parser generator for Rust☆10Jul 22, 2025Updated 7 months ago
- Go 语言学习之路:笔记、译文、思维导图等☆10May 9, 2024Updated last year
- [ Moved to Gitlab ] A filesystem browser for PySide.☆14Jul 19, 2016Updated 9 years ago
- ☆12Feb 9, 2019Updated 7 years ago
- https://codeberg.org/ccxvii/djvudec☆14Aug 13, 2025Updated 6 months ago
- ☆13Dec 25, 2021Updated 4 years ago
- https://www.youtube.com/watch?v=qsjGj_L1kyo☆10Jul 29, 2021Updated 4 years ago
- K-means clustering for large single-cell datasets☆12Feb 10, 2026Updated 3 weeks ago
- [2007] Windows tool, offers the ability to dynamically and transparently modify incoming and outgoing network traffic, as well as to redi…☆12Nov 27, 2017Updated 8 years ago
- BPG (Better Portable Graphics) is a new image format based on HEVC. Developed by Fabrice Bellard. http://bellard.org/bpg/☆14Dec 10, 2014Updated 11 years ago
- The future of the decentralized internet begins with the community [L0]☆10Nov 4, 2017Updated 8 years ago
- Python port of Boilerpipe library☆16Apr 6, 2018Updated 7 years ago
- Pytorch-adapted version of PymoNNto☆12Mar 2, 2025Updated last year
- A Persian Word2Vec Model trained by Wikipedia articles☆10Jan 5, 2018Updated 8 years ago
- PHi-C: deciphering Hi-C data into polymer dynamics☆10Aug 12, 2020Updated 5 years ago
- Lecture material (slides, script) for a distributed systems Bachelor class☆12Jul 31, 2024Updated last year
- Перевод документации по dplyr☆11Aug 14, 2016Updated 9 years ago
- R interface to Spark TensorFlow Connector☆13Sep 13, 2021Updated 4 years ago
- My rstudio::conf 2018 presentation slides☆10Jan 16, 2023Updated 3 years ago
- An experiment in trying to define a core and cleaned-up NumPy API: RNumPy☆13Feb 19, 2021Updated 5 years ago
- An efficient, lazy suffix tree implementation☆13Dec 10, 2020Updated 5 years ago
- Numerical Run Length Encoding and Arithmetic in Cython☆19Jan 28, 2026Updated last month
- Brand disambiguator for tweets to differentiate e.g. Orange vs orange (brand vs foodstuff), using NLTK and scikit-learn☆58Jul 11, 2013Updated 12 years ago
- Variant to disease dataset workflows for Open Targets Genetics☆13Aug 23, 2022Updated 3 years ago
- Learn C from scratch☆12Feb 27, 2012Updated 14 years ago
- Socks5man is a Socks5 management tool and Python library☆12Mar 10, 2023Updated 2 years ago
- man-utils is a collection of utils and libraries to help package maintainers easily create and maintain man pages for Python projects.☆10Jan 22, 2026Updated last month
- Go package using C++ rapidjson for better JSON handling☆10Oct 19, 2017Updated 8 years ago
- A very simple Miniblink and Python 3 binding example via ctypes. Sketchy and rough prototype as it is, it might, someday in the future, b…☆11Oct 17, 2020Updated 5 years ago