kvh / Python-Suffix-TreeLinks
Suffix tree for string searching
☆165Updated 3 years ago
Alternatives and similar repositories for Python-Suffix-Tree
Users that are interested in Python-Suffix-Tree are comparing it to the libraries listed below
Sorting:
- Python implementation of Suffix Trees and Generalized Suffix Trees.☆127Updated 5 years ago
- markov cluster algorithm - python☆82Updated 8 years ago
- A fast Python implementation of locality sensitive hashing.☆70Updated 10 years ago
- Yet Another Hidden Markov Model repository.☆249Updated 9 years ago
- word vector library☆34Updated 6 years ago
- High-performance Non-negative Matrix Factorizations (NMF) - Python/C++☆49Updated 7 years ago
- Python collections supporting parallel map/reduce style methods☆40Updated 2 years ago
- Explicit Decomposition with Neighborhoods python version☆44Updated last year
- Python wrapper around SVDLIBC, a fast library for sparse Singular Value Decomposition☆55Updated 12 years ago
- pyxDamerauLevenshtein implements the Damerau-Levenshtein (DL) edit distance algorithm for Python in Cython for high performance.☆249Updated 2 weeks ago
- Hierarchical Dirichlet processes. Topic models where the data determine the number of topics. This implements Gibbs sampling.☆149Updated 8 years ago
- Python implementations of TRESTLE, COBWEB/3, and COBWEB☆61Updated last year
- A tool for generating heatmaps from hierarchically clustered data.☆40Updated 7 years ago
- 🚀 🐍 Optimizes Python bytecode calculating linear recurrences, reducing the time complexity from O(n) to O(log n)☆182Updated 3 years ago
- A flexible version of CorEx developed for bio-data challenges that handles missing data, continuous/discrete variables, multi-CPU, overla…☆142Updated 4 years ago
- Tips and tricks for plotting in python☆28Updated 6 years ago
- NCLS. Basically a static interval-tree that is silly fast for both construction and lookups. Deprecated but maintained.☆223Updated 3 months ago
- fast, pure-python interval overlap testing☆52Updated 5 years ago
- C++ Ternary Search Tree implementation with Python bindings☆43Updated 7 years ago
- Topic modelling software using non-parametric methods☆70Updated 9 years ago
- A high performance implementation of HDBSCAN clustering. http://hdbscan.readthedocs.io/en/latest/☆100Updated 7 years ago
- Performs memory-efficient reservoir sampling on very large input files delimited by newlines☆69Updated 5 years ago
- Resources for a talk about streaming data analysis in Python☆15Updated 10 years ago
- CGAT-ruffus is a lightweight python module for running computational pipelines☆174Updated 4 years ago
- Machine-curated database of genetic disease and genome-wide association studies☆57Updated 6 years ago
- A pure python implementation of locality sensitive hashing for text documents☆85Updated 9 years ago
- Vector space representation of genetic data☆36Updated 8 years ago
- Python Module for decision tree based hierarchical multi-classification☆41Updated 8 years ago
- HAT-Trie for Python☆86Updated 9 years ago
- Recurrent Neural Network language modeling toolkit☆38Updated 11 years ago