Alternatives and similar repositories for PCAonGPU

Users that are interested in PCAonGPU are comparing it to the libraries listed below

• czimaginginstitute / 2024_czii_mlchallenge_notebooks
  The repository hosting example notebooks for 2024 CZII cryoET machine learning challenge
  ☆38Updated last year
• recursionpharma / maes_microscopy
  Official repo for Recursion's accepted spotlight paper at NeurIPS 2023 Generative AI & Biology workshop.
  ☆71Updated 8 months ago
• slaclab / cryoEM-notebooks
  repository of notebooks for cryoEM
  ☆14Updated 5 years ago
• TorchDR / TorchDR
  TorchDR - PyTorch Dimensionality Reduction
  ☆183Updated this week
• compSPI / cryoAI
  ☆44Updated 2 years ago
• ml-struct-bio / hydra
  Neural multiclass ab initio reconstruction for cryo-EM.
  ☆13Updated last year
• crosszamirski / Label-free-prediction-of-Cell-Painting-from-brightfield-images
  Label Free Prediction of Cell Painting from Brightfield Images
  ☆34Updated 3 years ago
• jmhb0 / o2vae
  [Nature Communications] O2VAE: a model for orientation-invariant representation learning (phenotyping) in cell biology data
  ☆38Updated 10 months ago
• jump-cellpainting / JUMP-Target
  Lists and 384-well plate maps of compounds and genetic perturbations designed to assess connectivity in profiling assays
  ☆24Updated last year
• balbasty / torch-interpol
  High-order spline interpolation in PyTorch
  ☆69Updated last year
• ccpem / affinity-vae
  Self-supervised method for disentanglement, clustering and classification of objects in multidimensional image data
  ☆16Updated last year
• zhonge / cryodrgn_empiar
  ☆31Updated 5 years ago
• marissaweis / ssl_neuron
  Code to the paper "Self-Supervised Graph Representation Learning for Neuronal Morphologies"
  ☆16Updated last year
• BioinfoMachineLearning / cryoppp
  The programs of creating cryo-EM particle picking datasets
  ☆79Updated 2 years ago
• dpeerlab / WassersteinWormhole
  Transformer Based Embeddings of Wasserstein Distance
  ☆22Updated 5 months ago
• ml-jku / cloome
  ☆36Updated last year
• JacobHanimann / scDINO
  Self-Supervised Vision Transformers for multiplexed imaging datasets
  ☆60Updated last year
• mehta-lab / VisCy
  computer vision models for single-cell phenotyping
  ☆87Updated this week
• instadeepai / LightMHC
  LightMHC: A Light Model for pMHC Structure Prediction with Graph Neural Networks
  ☆12Updated 2 years ago
• broadinstitute / DINO4Cells_code
  This repo will contain the code for training DINO models and extracting features
  ☆14Updated 2 years ago
• AllenCell / aics-shparam
  ☆22Updated 9 months ago
• karimknaebel / turm
  TUI for the Slurm Workload Manager
  ☆422Updated last week
• fabiodimarco / torch-levenberg-marquardt
  PyTorch implementation of Levenberg-Marquardt training algorithm
  ☆90Updated 2 months ago
• genbio-ai / AIDO
  AI-Driven Digital Organism (AIDO) is a system of multiscale foundation models for predicting, simulating and programming biology at all l…
  ☆144Updated 4 months ago
• alan-turing-institute / grace
  Graph Representation Analysis for Connected Embeddings
  ☆34Updated last year
• jmschrei / ledidi
  Ledidi turns any machine learning model into a biological sequence editor, allowing you to design sequences with desired properties.
  ☆100Updated last week
• phonchi / Computational-CryoET
  A curated list of awesome computational cryo-ET methods.
  ☆67Updated 2 months ago
• m1balcerak / EnergyMatching
  [NeurIPS 2025] Official repository for "Energy Matching: Unifying Flow Matching and Energy-Based Models for Generative Modeling"
  ☆199Updated 3 months ago
• dhdegroot / Bonsai-data-representation
  All code necessary for reconstructing Bonsai-trees on high-dimensional data and visualizing them in Bonsai-scout
  ☆85Updated 2 months ago
• leeyang / DRfold2
  ☆42Updated last week