QI2lab / mcSIMLinks
Code for running a multicolor structured illumination microscopy (SIM) experiment using a DLP6500 digital micromirror device (DMD) and performing SIM reconstruction.
☆62Updated 2 weeks ago
Alternatives and similar repositories for mcSIM
Users that are interested in mcSIM are comparing it to the libraries listed below
Sorting:
- Online available files of "A practical guide to fast structured illumination microscopy"☆17Updated 9 years ago
- 🚀⏱️ Official implementation for "neural space-time model for dynamic multi-shot imaging"☆42Updated 10 months ago
- OpenSIM matlab code☆54Updated 9 years ago
- ☆14Updated 5 years ago
- Python bindings for scalar and vectorial models of the 3D microscope point spread function.☆50Updated last year
- python functions for simulating optical transfer functions☆75Updated last year
- Free Analysis and Interactive Reconstruction for Structured Illumination Microscopy☆95Updated 3 weeks ago
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆27Updated 10 months ago
- Learning the experimental design for Fourier Ptychographic Microscopy☆48Updated 5 years ago
- A toolbox for analysing and simulating Image Scanning Microscopy (ISM) datasets.☆14Updated 2 months ago
- Official implementation of Ring Deconvolution Microscopy from https://www.nature.com/articles/s41592-025-02684-5☆51Updated 3 weeks ago
- M. Chen, Z. F. Phillips, and L. Waller, Quantitative differential phase contrast (DPC) microscopy with computational aberration correctio…☆35Updated 3 years ago
- Official MATLAB implementation of the "Sparse deconvolution" -v1.0.3☆93Updated 4 months ago
- STED simulation platform written in Python☆13Updated 11 months ago
- A python controller for Texas Instruments DLPLCR6500EVM evaluation module for DLP technology. The controller can fully control the "patte…☆43Updated 4 years ago
- Official Python implementation of the 'Sparse deconvolution'-v0.3.0☆56Updated last year
- A deeplearning network based on Richardson-Lucy formula☆49Updated 2 years ago
- Automatic Correction for sCMOS-related Noise☆18Updated 3 years ago
- ☆13Updated 6 years ago
- Sofipackage is a Matlab-based software for super-resolution optical fluctuation imaging (SOFI) analysis.☆10Updated 3 years ago
- Wave optical models and inverse algorithms for label-agnostic imaging of density & orientation.☆32Updated last week
- Differentiable wave optics using JAX! Documentation can be found at https://chromatix.readthedocs.io☆133Updated 3 months ago
- Information driven structured illumination microscopy using noise-controlled image reconstructions☆13Updated 4 years ago
- Multiscale Image Restoration for fluorescence microscopy☆10Updated 2 years ago
- Code for the paper: Image-guided computational holographic wavefront shaping. https://doi.org/10.1038/s41566-024-01544-6.☆14Updated 10 months ago
- code of the registration and deconvolution project☆35Updated 4 years ago
- ☆18Updated 3 years ago
- ☆29Updated 2 years ago
- SOFI simulation tool: a software package for simulating and testing super-resolution optical fluctuation imaging☆16Updated 8 years ago
- HiLo microscopy reconstruction with NLM denoising☆10Updated 7 months ago