colinlaney / animal-tracking
Object tracking with OpenCV in open field behavioral test (overhead view maze)
☆51Updated 3 years ago
Related projects ⓘ
Alternatives and complementary repositories for animal-tracking
- Python and OpenCV based object tracking software☆118Updated 2 years ago
- R package for segmentation, registration and generating web-based brain atlases from microscope images☆86Updated 3 years ago
- Animal Part Tracker☆72Updated this week
- computes intrinsic cell features from intracellular electrophysiology data☆27Updated 3 weeks ago
- High-throughput real-time tracker for delivery of stimuli and measurement of animal behavior.☆24Updated 9 months ago
- Janelia Animal Behavior Detector☆75Updated 4 months ago
- A modular package to control stimulation and track behaviour☆44Updated 2 weeks ago
- Videotracking system that keeps track of individual identities. www.idtracker.es☆35Updated 8 years ago
- Various scripts to support deeplabcut and what to do afterwards!☆145Updated last year
- A tool for drawing ROIs on videos and analysing deeplabcut videos.☆31Updated 3 years ago
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆52Updated last year
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆51Updated 4 years ago
- The U-Net Segmentation plugin for Fiji (ImageJ)☆87Updated 2 years ago
- ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)☆48Updated last week
- a napari plugin for labeling and refining keypoint data within DeepLabCut projects☆52Updated 3 weeks ago
- AlphaTracker is a computer vision pipeline with the practical and real-time advantages , which requires minimal hardware requirements and…☆65Updated last year
- Sample implementation of the MotionMapper behavioral analysis algorithms☆77Updated 4 years ago
- Live Mouse Tracker analysis☆24Updated this week
- Free, platform independent, behavior tracking software.☆123Updated 4 months ago
- This is the repository for a Python bioimage analysis course which establishes the fundamentals of image analysis in the context of biolo…☆132Updated 4 years ago
- Headless DeepLabCut (no GUI support)☆30Updated 3 years ago
- Python package for analysis of dynamic fluorescence microscopy data☆100Updated 5 years ago
- PyRat is a user friendly library in python to analyze data from the DeepLabCut. Developed to help researchers unfamiliar with programming…☆46Updated 7 months ago
- Automated 3D brain registration with support for multiple species and atlases.☆123Updated last week
- SamuROI - Structured analysis of multiple user-defined ROIs, an open source Python-based analysis environment for imaging data.☆17Updated 5 years ago
- AICS Segmentation (One-Way) Mirror☆45Updated 3 years ago
- a platform from monitoring animal behaviour in real time from a raspberry pi☆17Updated this week
- a module for kinematic analysis of deeplabcut outputs☆134Updated 11 months ago
- a Python machine learning library for neurophysiology data☆36Updated 6 years ago
- Dendritic Spine Analysis Software☆13Updated last year