colinlaney / animal-trackingLinks
Object tracking with OpenCV in open field behavioral test (overhead view maze)
☆53Updated 4 years ago
Alternatives and similar repositories for animal-tracking
Users that are interested in animal-tracking are comparing it to the libraries listed below
Sorting:
- Python and OpenCV based object tracking software☆124Updated 3 years ago
- Videotracking system that keeps track of individual identities. www.idtracker.es☆38Updated 9 years ago
- The U-Net Segmentation plugin for Fiji (ImageJ)☆89Updated 3 years ago
- SamuROI - Structured analysis of multiple user-defined ROIs, an open source Python-based analysis environment for imaging data.☆17Updated 6 years ago
- R package for segmentation, registration and generating web-based brain atlases from microscope images☆92Updated 4 years ago
- A modular package to control stimulation and track behaviour☆47Updated last year
- Animal Part Tracker☆85Updated this week
- PyKNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for high-throughput image annotation…☆18Updated 5 years ago
- 3-D imaging visualisation through slicing☆31Updated 11 months ago
- Docker container for running DeepLabCut 2.0, 2.1 (linux support only). Now, DLC main supports 2.2+☆50Updated 4 years ago
- A Primer on Motion Capture with Deep Learning:Principles, Pitfalls and Perspectives☆22Updated 4 years ago
- Janelia Animal Behavior Detector☆81Updated last month
- Dash app for viewing brain surfaces saved as MNI files. Data from https://github.com/aces/brainbrowser☆36Updated 2 years ago
- WormPose: Image synthesis and convolutional networks for pose estimation in C. elegans☆53Updated 2 years ago
- Python scripts for tracking cells in fluorescent microscopy.☆11Updated 8 years ago
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 5 years ago
- Fast, Simple Calcium Imaging Segmentation with Fully Convolutional Networks (https://arxiv.org/abs/1707.06314)☆29Updated 3 years ago
- Python package for analysis of dynamic fluorescence microscopy data☆103Updated 6 years ago
- Live Mouse Tracker analysis☆33Updated this week
- Dendritic Spine Analysis Software☆13Updated 2 years ago
- LEAP is now deprecated -- check out its successor SLEAP!☆210Updated 5 years ago
- Motion Tracking☆14Updated 2 years ago
- Sample implementation of the MotionMapper behavioral analysis algorithms☆81Updated 5 years ago
- Fiji library to perform image segmentation based on the Weka learning schemes☆120Updated last year
- A Python toolbox for Fast Image Signal Separation Analysis, designed for Calcium Imaging data.☆33Updated last week
- AlphaTracker is a computer vision pipeline with the practical and real-time advantages , which requires minimal hardware requirements and…☆74Updated 2 years ago
- High-throughput real-time tracker for delivery of stimuli and measurement of animal behavior.☆23Updated last month
- Axon/Myelin segmentation using Deep Learning☆123Updated last week
- a Python machine learning library for neurophysiology data☆36Updated 7 years ago
- Lineage Mapper Fiji plugin and MATLAB source code☆19Updated 3 years ago