colinlaney / animal-trackingLinks
Object tracking with OpenCV in open field behavioral test (overhead view maze)
☆53Updated 4 years ago
Alternatives and similar repositories for animal-tracking
Users that are interested in animal-tracking are comparing it to the libraries listed below
Sorting:
- Animal Part Tracker☆84Updated this week
- Sample implementation of the MotionMapper behavioral analysis algorithms☆81Updated 5 years ago
- Docker container for running DeepLabCut 2.0, 2.1 (linux support only). Now, DLC main supports 2.2+☆50Updated 3 years ago
- Python and OpenCV based object tracking software☆124Updated 3 years ago
- R package for segmentation, registration and generating web-based brain atlases from microscope images☆88Updated 4 years ago
- Various scripts to support deeplabcut and what to do afterwards!☆156Updated 2 months ago
- A modular package to control stimulation and track behaviour☆46Updated 10 months ago
- LEAP is now deprecated -- check out its successor SLEAP!☆209Updated 5 years ago
- SamuROI - Structured analysis of multiple user-defined ROIs, an open source Python-based analysis environment for imaging data.☆17Updated 6 years ago
- Workshop material for using DeepLabCut☆145Updated last year
- Janelia Animal Behavior Detector☆81Updated 2 weeks ago
- Videotracking system that keeps track of individual identities. www.idtracker.es☆36Updated 9 years ago
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 5 years ago
- High-throughput real-time tracker for delivery of stimuli and measurement of animal behavior.☆23Updated 7 months ago
- Free, platform independent, behavior tracking software.☆139Updated 3 months ago
- A tool for drawing ROIs on videos and analysing deeplabcut videos.☆33Updated 4 years ago
- End-user version of the Mouse Action Recognition System (MARS)☆74Updated last year
- AlphaTracker is a computer vision pipeline with the practical and real-time advantages , which requires minimal hardware requirements and…☆72Updated last year
- SDK for running DeepLabCut on a live video stream☆213Updated 3 weeks ago
- Headless DeepLabCut (no GUI support)☆30Updated 4 years ago
- Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…☆201Updated last year
- a module for kinematic analysis of deeplabcut outputs☆143Updated last year
- Python package for analysis of dynamic fluorescence microscopy data☆101Updated 6 years ago
- Distributed behavioral experiments☆95Updated 7 months ago
- The U-Net Segmentation plugin for Fiji (ImageJ)☆90Updated 2 years ago
- A Bonsai interface for real-time markerless pose estimation using DeepLabCut☆51Updated 3 months ago
- a Python machine learning library for neurophysiology data☆36Updated 6 years ago
- A deep learning framework for multi-animal pose tracking.☆509Updated last week
- GUI to run DeepLabCut on live video feed☆62Updated 11 months ago
- WormPose: Image synthesis and convolutional networks for pose estimation in C. elegans☆50Updated 2 years ago