colinlaney / animal-trackingLinks
Object tracking with OpenCV in open field behavioral test (overhead view maze)
☆53Updated 4 years ago
Alternatives and similar repositories for animal-tracking
Users that are interested in animal-tracking are comparing it to the libraries listed below
Sorting:
- Python and OpenCV based object tracking software☆124Updated 3 years ago
- Videotracking system that keeps track of individual identities. www.idtracker.es☆38Updated 9 years ago
- Docker container for running DeepLabCut 2.0, 2.1 (linux support only). Now, DLC main supports 2.2+☆50Updated 4 years ago
- Animal Part Tracker☆85Updated this week
- A modular package to control stimulation and track behaviour☆46Updated last year
- Sample implementation of the MotionMapper behavioral analysis algorithms☆82Updated 5 years ago
- High-throughput real-time tracker for delivery of stimuli and measurement of animal behavior.☆23Updated 3 weeks ago
- Workshop material for using DeepLabCut☆147Updated 3 months ago
- R package for segmentation, registration and generating web-based brain atlases from microscope images☆93Updated 4 years ago
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆62Updated 2 years ago
- Janelia Animal Behavior Detector☆82Updated 2 months ago
- Python package for analysis of dynamic fluorescence microscopy data☆103Updated 6 years ago
- WormPose: Image synthesis and convolutional networks for pose estimation in C. elegans☆53Updated 2 years ago
- Various scripts to support deeplabcut and what to do afterwards!☆160Updated 7 months ago
- a Python machine learning library for neurophysiology data☆36Updated 7 years ago
- A tutorial on neuroinformatics resources for computational modellers☆68Updated 6 years ago
- NeuroTools is a collection of tools for representing and anlyzing neuroscientific data.☆32Updated 5 years ago
- Free, platform independent, behavior tracking software.☆143Updated 7 months ago
- TRex, a fast multi-animal tracking system with markerless identification, and 2D estimation of posture and visual fields.☆114Updated 2 weeks ago
- The U-Net Segmentation plugin for Fiji (ImageJ)☆90Updated 3 years ago
- Headless DeepLabCut (no GUI support)☆30Updated 4 years ago
- Problem sets and materials for systems and computational neuroscience course☆16Updated 9 months ago
- Fast software for high-dimensional cluster analysis using the masked EM algorithm for Gaussians mixtures☆31Updated 6 years ago
- A tool for drawing ROIs on videos and analysing deeplabcut videos.☆35Updated 4 years ago
- GUI to run DeepLabCut on live video feed☆66Updated this week
- Generate a matrix of predictors corresponding to different behavioral variables and process a regression-based encoding model to obtain t…☆18Updated 6 years ago
- LEAP is now deprecated -- check out its successor SLEAP!☆210Updated 5 years ago
- A Python toolbox for Fast Image Signal Separation Analysis, designed for Calcium Imaging data.☆33Updated last week
- Motion Tracking☆14Updated 3 years ago
- Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…☆203Updated last year