cBioPortal / cbioportal-docker-composeLinks
Run cBioPortal using Docker Compose
☆20Updated 2 weeks ago
Alternatives and similar repositories for cbioportal-docker-compose
Users that are interested in cbioportal-docker-compose are comparing it to the libraries listed below
Sorting:
- A centralized location for storing curated data from cBioPortal☆198Updated last week
- Repository of databases for omic data☆15Updated 2 years ago
- Warp Analysis Research Pipelines☆224Updated last week
- A modular annotation tool for genomic variants☆142Updated 2 weeks ago
- ☆189Updated 2 years ago
- Annotates variants in MAF with OncoKB annotation.☆140Updated 3 weeks ago
- The Pharmacogenomic Clinical Annotation Tool☆156Updated 2 weeks ago
- IGV Web App☆127Updated 2 weeks ago
- Call and score variants from WGS/WES of rare disease patients.☆112Updated this week
- A bioinformatics software tool for clinical interpretation of genetic variants by the 2015 ACMG-AMP guideline☆205Updated 2 years ago
- Associations of genomic features, drugs and diseases☆48Updated 3 years ago
- Pipeline to find aberrant events in RNA-Seq data, useful for diagnosis of rare disorders☆160Updated last month
- ASCAT R package☆195Updated 4 months ago
- Workflows for processing high-throughput sequencing data for variant discovery with GATK4 and related tools☆160Updated 3 years ago
- A Python package for pharmacogenomics (PGx) research☆82Updated 3 weeks ago
- Automated and customizable preprocessing of Next-Generation Sequencing data, including full (sc)ATAC-seq, ChIP-seq, and (sc)RNA-seq workf…☆166Updated 2 months ago
- Explore gnomAD datasets on the web☆85Updated last week
- Easily download publicly available GWAS summary statistics.☆78Updated 2 years ago
- TransVar - multiway annotator for precision medicine☆126Updated 2 years ago
- GATK RNA-Seq Variant Calling in Nextflow☆137Updated 3 years ago
- Documentation and description of AWS iGenomes S3 resource.☆120Updated last year
- Workflows for converting between sequence data formats☆40Updated 4 years ago
- HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.☆106Updated 7 months ago
- The analysis repository for the Open Pediatric Brain Tumor Atlas Project☆106Updated 2 years ago
- Probabilistic model for inferring clonal population structure from deep NGS sequencing.☆118Updated 5 years ago
- a snakemake pipeline to process ChIP-seq files from GEO or in-house☆131Updated last month
- Pangolin is a deep-learning method for predicting splice site strengths.☆85Updated last year
- Fast and accurate gene fusion detection from RNA-Seq data☆258Updated 4 months ago
- DNA sequencing analysis notes from Ming Tang☆149Updated 2 years ago
- Precision HLA typing from next-generation sequencing data☆206Updated last year